Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01588 ATGAATATTCTTCCTACCATACTAGTTATTTGTAACATACTATTTTTCTTCTCCAAAATTTCTTGTGCAACCGATACCATTACACAATCACAACCACTTCTCGATGGAAGCACCTTGATTTCTAAGGGTGAAGTATTCGAACTGGGTTTCTTTAATCCTGGTAATTCCAACAACCGCTATGTTGGAATTTGGTACAAAAATATCCCTGATAGAAAAGTTGTTTGGGTTGCCAACCGTGACAATCCAATAAAAGACAACTCTGGCAAGTTGATCATAAGTCAAAGTCGATTTCTTGCGCTTGTTGATAAGAATCAATCTCTTTTATGGTCAACAAACACTACAACAAAGGTTACAAATCCAATTGTGCAACTCTTGGATAATGGAAATTTAGTACTAAGAAATGAGAAGCAGACCGGCGACGAACATTTTCTATGGCAGAGTTTTGATCATCCATGTGACACAATATTGTCAGGAATGAAGATTGGATGGGATAAAAAAAGGGGTTTTGATAGGCGTCTCACGGCTTGGAAAAATTGGAATGACCCATCTTCAGGTGAGCTTACTTTATCTATGGTACTAACTCCTAATCCCGAAGCCTTTATGTCAAAAGGCTCGACAAAACTCTACAGAACAGGACCATGGACTGGTCGTCGATCAAGTGGAATAATTGGATTGAGAGAAAATCCACTATATAATTATGAATTTCTCAGTAATGAAGATGAAGTATATTATATGTTTACACTCAAAAATAGCACAGTGGTTTCTATAATTGTTTTTAACGAAACCCTTTCTGTTCGTCAACGCCTTGTTTGGATTCAAGAATCTAAAACATGGAATGTTTACCAAACCATACCCCAAGATAATTGTGATATATACAATGTTTGTGGAGCAAATGGACTATGTGTGCTCGATGCATCGCCTATGTGTCAATGTCTCAAGGGATTTAGGCCAAAATCACCACAACAGTGGAGTGCAACAGATTGGAAACAAGGATGTGTGCGTATCGGTAATTGGAGTTGTGAGGCCAAAGTCAATGATGGATTTGAAAGAATTTCTGGAATGAAATTGCCGGATACTGCACATTCTTGGATTGATGAGAAAATGACACTAGAAAATTGCAAGGCTAAATGTTTGGAAAATTGTTCATGCAGTGCTTACTCGAGTTTAGATGCAACTGGAGTAGGTAATGGTTGTTCTATCTGGTTCGGTGATCTCATTGATCTTAGAATTTCACCTACCGGACAAGACCTGTATATTCGAAGGGAAGCTTCAAATATCGGTAAAAATGGGCATACCAAAACGGTAGTATTGGCAGTTTCAATTACAGTTCCAACAATGCTTGTGATGTTATTGGCATTCACCTACATATATGTAACAAAGGCAAAGTATAAAAGAGAGAAAGAAGAAGACGCACATGATGATTTCGAGCTACCTTGCTTTGATCGAGCTACAATATTGAAGGCAACAAAAAATTTCTCTCTTGATAATAAGCTCAGTGAAGGTGGTTTTGGATCAGTATACAAGGGTACATTGCTTAATGGACAAGAAATTGCTGTCAAAAGACTTTTAATGAGTTCAGGGCAAGGATTAAAGGAGTTTAAAAATGAAGTTATGTTATGTGCTAAACTTCAACACCGGAATCTTGTTAAGGTTGTCGGTTTTTGTATTGAAGGAGAGGAGAAAATGTTGATTTATGAATATATGTCCAACAAAAGTCTTGATTTATTTCTTTTTGATTTTGGGATAGCTAGAATATGTGGAAATGATCAAATTGAAGGGAACACAAACAAAATAGTTGGCACATACGGTTACATGGCACCTGAATATGCTATTGATGGGTTATTCTCGACAAAATCAGATGTATTTAGTTTCGGTGTATTATTATTAGAAATTATCAGCGGAAGAAAAAATAGAGCACATAACTACGAAGAACGCGATCAAAATCTTATTGGATATGCTTGGAGATTGTGGAAAGAAGACACTCCTCTCAAACTGATTGATGATTATATAAAAGAATCATGTATTGAATCTGAAGTATTGCGTTGCATTCAAATTGGTCTATTATGCCTACAACATGATCCTGATGATAGGCCAAGCATGACATCTGTTATTTTGATGTTGAGTAGTGAAAGTACTTTATCCTATAATCTAAAGGAACCTGGTTTCTTAATTAAAAGGTTAACAGCTGAAGGAGAACCTTCTTCTCAACAAATATCTAACTATTAA 2226 0.3625 MNILPTILVICNILFFFSKISCATDTITQSQPLLDGSTLISKGEVFELGFFNPGNSNNRYVGIWYKNIPDRKVVWVANRDNPIKDNSGKLIISQSRFLALVDKNQSLLWSTNTTTKVTNPIVQLLDNGNLVLRNEKQTGDEHFLWQSFDHPCDTILSGMKIGWDKKRGFDRRLTAWKNWNDPSSGELTLSMVLTPNPEAFMSKGSTKLYRTGPWTGRRSSGIIGLRENPLYNYEFLSNEDEVYYMFTLKNSTVVSIIVFNETLSVRQRLVWIQESKTWNVYQTIPQDNCDIYNVCGANGLCVLDASPMCQCLKGFRPKSPQQWSATDWKQGCVRIGNWSCEAKVNDGFERISGMKLPDTAHSWIDEKMTLENCKAKCLENCSCSAYSSLDATGVGNGCSIWFGDLIDLRISPTGQDLYIRREASNIGKNGHTKTVVLAVSITVPTMLVMLLAFTYIYVTKAKYKREKEEDAHDDFELPCFDRATILKATKNFSLDNKLSEGGFGSVYKGTLLNGQEIAVKRLLMSSGQGLKEFKNEVMLCAKLQHRNLVKVVGFCIEGEEKMLIYEYMSNKSLDLFLFDFGIARICGNDQIEGNTNKIVGTYGYMAPEYAIDGLFSTKSDVFSFGVLLLEIISGRKNRAHNYEERDQNLIGYAWRLWKEDTPLKLIDDYIKESCIESEVLRCIQIGLLCLQHDPDDRPSMTSVILMLSSESTLSYNLKEPGFLIKRLTAEGEPSSQQISNY 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01588 741 ProSiteProfiles Protein kinase domain profile. 386 713 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre5g01588 741 Gene3D Phosphorylase Kinase; domain 1 454 563 - -
Trre5g01588 741 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 8 698 - -
Trre5g01588 741 Pfam PAN-like domain 340 408 IPR003609 -
Trre5g01588 741 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 587 712 - -
Trre5g01588 741 CDD PAN_AP_plant 339 420 - -
Trre5g01588 741 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 182 IPR036426 -
Trre5g01588 741 ProSiteProfiles PAN/Apple domain profile. 340 423 IPR003609 -
Trre5g01588 741 SMART blect_4 30 151 IPR001480 -
Trre5g01588 741 ProSiteProfiles Bulb-type lectin domain profile. 24 145 IPR001480 -
Trre5g01588 741 SMART ntp_6 343 421 IPR003609 -
Trre5g01588 741 Pfam D-mannose binding lectin 73 177 IPR001480 -
Trre5g01588 741 PIRSF SRK 1 579 IPR024171 GO:0004674
Trre5g01588 741 PIRSF SRK 579 740 IPR024171 GO:0004674
Trre5g01588 741 Gene3D - 18 148 IPR036426 -
Trre5g01588 741 ProSiteProfiles EGF-like domain profile. 285 321 IPR000742 -
Trre5g01588 741 Gene3D Hepatocyte Growth Factor 339 417 - -
Trre5g01588 741 Pfam Protein tyrosine and serine/threonine kinase 493 577 IPR001245 GO:0004672|GO:0006468
Trre5g01588 741 Pfam Protein tyrosine and serine/threonine kinase 579 704 IPR001245 GO:0004672|GO:0006468
Trre5g01588 741 Pfam S-locus glycoprotein domain 209 319 IPR000858 GO:0048544
Trre5g01588 741 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 148 - -
Trre5g01588 741 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 457 567 - -
Trre5g01588 741 SUPERFAMILY Protein kinase-like (PK-like) 476 710 IPR011009 -
Trre5g01588 741 CDD B_lectin 30 151 IPR001480 -
Trre5g01588 741 Gene3D Transferase(Phosphotransferase) domain 1 564 719 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01588 Trre-Chr5 11592506 11595376 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g01588 468 725 Receptor kinase-like Gene Family AT4G23150 44.904 2.74e-79 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre5g01588 PK_Tyr_Ser-Thr 5.2e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01588 - - tpra:123915292 1127.85