Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01586 ATGAATATTCTTCCTACCATACTAGTTATTAGTATGTTACTATTTTTCTTCTCCAAAATTTCTTGTGCAACCGATACCATTACACAATCACAACCACTTCTCGATGGAAGCACCTTGATTTCTAAGGGTGAAGTATTCGAACTGGGTTTCTTTAATCCTGGTAATTCCAACAATCGCTATGTTGGAATTTGGTACAAAAATATCCCTGATAAAAGAGTTGTTTGGGTTGCCAACCGTGACAATCCAATAAAAGACAATTCTGGCAAGTTGATTATAAGTCAAGGTCGACTTCTATCGCTTGTCGATAAGAATCAATCTCTTTTATGGTCAACAAACACAACAACAAAGGTTTCAAATCCAATTGTGCAACTCTTGGATAATGGAAATTTAGTACTTAAAAATGATGGTGAAGAAAATTTTCTATGGCAAAGTTTTGATCATCCTTGTGATACAATATTATCCGAGATGAAGGTTGGTTGGGACAAAAAAAGAGGTCTTGCTAGGAATCTCACTGCATGGAAAAATTGGGATGATCCATCTTCAGGTGAATTTACTTCAGCTATGATTCTAACTCCTAATCCTGAAAGCTTTATATTTGAAGGCTCAACAAAAATCTTTAGGACAGGACCATGGACAGGTTCACGATCTAGTGGAGTAACTAGTGGAATAATTGGATTTCAAGAAAATCCACTTTTTGATTATGAATTTGTCAACAATGAAAATGAGGTATATTATAAGTTCACACTAAAAAATAGTTCTGTGGTTTCTATAATTGTTATGAACCAATCACTTTCTCTTCGTCAACGACTTGTTTGGATTCCAGAATCCAAAACATGGGGTGTTTATTCAAAATTACCACAAGATAGTTGTGATGCTTACAATGTTTGCGGAGCAAATGGGCAATGTGCACTTGATGCATCGCCCATGTGCCAATGTTTAGATGGATTTAAGCCGAAATCACCACAACAATGGAATGGAATGGACTGGAGAGGAGGATGTGTGCGTAATGGTAATTGGAGTTGCGGGGTTAAAAAGAGAGATGGGTTTAAAAAATTTGTTGGTATAAAATTGCCAGATACTACACATTCTTGGATTGATGAGAAAATGACACTCGAAGATTGTAAGGCTAAATGCTTGAAAAATTGTTCGTGTAGTGCTTACTCAAGTTTAGACTCAACTAGAATAGATGGTGGTTGTTCTCTTTGGTTTGGCGATCTTATTGATTTGAGAGTTTTACAAAGAGGAAACGACGTATATGTTCGAGTAGACGCTTCAGATATCGGAGATGGAAATGGGCACAAAAAAATGGTAGAATTAGTGGTATCAACTACTGTTCCAGTAGTCTTTGTGATTTTATTGGCATTCACCTACATTTATATCAAAAAGGCAAAATATAAAGAGAAAATAGAGAAAATCACAAGGTTGGAAGAGAAAGAAGAAGATACACATGGAGATTTTGAGCTTCCTATTTATGATCAAGCTACAATACTCAAGGCAACAAATAACTTCTCTTTCAACAATAAGCTTGGTGAAGGTGGTTTTGGACCCGTATACAAGGGTATATTGCTTGATGGACAAGAAATTGCTGTCAAAAGGCTATCAAAGAGTTCCGGACAAGGATCGAAAGAGTTTAAAAATGAAGTTATATTATGTGCTAAACTTCAACATCGAAATCTTGTTAAGGTTGTTGGTTGCTGTATTGAAGGAGATGAGAAAATTTTGATCTATGAATACATGTCGAATAATAGCCTCGATTCATTTCTTTTTGATTTTGGATTGGCTAGAATGTGTGGAGGTGATCAAATTGAAGGGAGAACAAACAAAATAGTTGGCACATACGGTTATATGGCTCCGGAATATGCTATTGATGGACTATTCTCTATAAAATCAGATGTTTTTAGCTATGGTGTATTATTATTGGAAATAATTAGCGGAAAGAAAAATAGAGCACGGAGCTACCGAGAACACGATCATAATCTTATCGGATATGCATGGAGATTATGGAAAGAGGGAATTCCACTCAAATTGGTTGATGATAATATAAGGGACTCATGCATTGAATTTGAAGCAATACGTTGTATTCAAATTGCTCTACTATGTGTACAACATCATCCAGACGATAGACCAAACATGACATCTGTAGTTGTGATGTTAAATAGTGAAAATACTCTACCAATACCAAAGGAACCTGGTTTCTTGATTAAAATGTTTTCAACTGAAGGAGAACCTTCTTCTGGAAAAGAAATATCTTCAACAAATGAAGTAACTATATCACTATTAGAGGCTAGATAG 2292 0.3551 MNILPTILVISMLLFFFSKISCATDTITQSQPLLDGSTLISKGEVFELGFFNPGNSNNRYVGIWYKNIPDKRVVWVANRDNPIKDNSGKLIISQGRLLSLVDKNQSLLWSTNTTTKVSNPIVQLLDNGNLVLKNDGEENFLWQSFDHPCDTILSEMKVGWDKKRGLARNLTAWKNWDDPSSGEFTSAMILTPNPESFIFEGSTKIFRTGPWTGSRSSGVTSGIIGFQENPLFDYEFVNNENEVYYKFTLKNSSVVSIIVMNQSLSLRQRLVWIPESKTWGVYSKLPQDSCDAYNVCGANGQCALDASPMCQCLDGFKPKSPQQWNGMDWRGGCVRNGNWSCGVKKRDGFKKFVGIKLPDTTHSWIDEKMTLEDCKAKCLKNCSCSAYSSLDSTRIDGGCSLWFGDLIDLRVLQRGNDVYVRVDASDIGDGNGHKKMVELVVSTTVPVVFVILLAFTYIYIKKAKYKEKIEKITRLEEKEEDTHGDFELPIYDQATILKATNNFSFNNKLGEGGFGPVYKGILLDGQEIAVKRLSKSSGQGSKEFKNEVILCAKLQHRNLVKVVGCCIEGDEKILIYEYMSNNSLDSFLFDFGLARMCGGDQIEGRTNKIVGTYGYMAPEYAIDGLFSIKSDVFSYGVLLLEIISGKKNRARSYREHDHNLIGYAWRLWKEGIPLKLVDDNIRDSCIEFEAIRCIQIALLCVQHHPDDRPNMTSVVVMLNSENTLPIPKEPGFLIKMFSTEGEPSSGKEISSTNEVTISLLEAR 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01586 763 SMART ntp_6 344 422 IPR003609 -
Trre5g01586 763 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 145 - -
Trre5g01586 763 CDD B_lectin 30 148 IPR001480 -
Trre5g01586 763 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 179 IPR036426 -
Trre5g01586 763 SMART blect_4 30 148 IPR001480 -
Trre5g01586 763 Pfam S-locus glycoprotein domain 206 320 IPR000858 GO:0048544
Trre5g01586 763 Gene3D Phosphorylase Kinase; domain 1 462 578 - -
Trre5g01586 763 SUPERFAMILY Protein kinase-like (PK-like) 487 730 IPR011009 -
Trre5g01586 763 ProSiteProfiles PAN/Apple domain profile. 341 424 IPR003609 -
Trre5g01586 763 Gene3D Hepatocyte Growth Factor 340 422 - -
Trre5g01586 763 ProSiteProfiles EGF-like domain profile. 286 322 IPR000742 -
Trre5g01586 763 ProSiteProfiles Bulb-type lectin domain profile. 24 145 IPR001480 -
Trre5g01586 763 PIRSF SRK 590 763 IPR024171 GO:0004674
Trre5g01586 763 PIRSF SRK 1 590 IPR024171 GO:0004674
Trre5g01586 763 Pfam Domain of unknown function (DUF3403) 721 763 IPR021820 GO:0004674
Trre5g01586 763 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 468 578 - -
Trre5g01586 763 Pfam D-mannose binding lectin 73 174 IPR001480 -
Trre5g01586 763 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 9 709 - -
Trre5g01586 763 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 598 723 - -
Trre5g01586 763 Gene3D - 18 145 IPR036426 -
Trre5g01586 763 Gene3D Transferase(Phosphotransferase) domain 1 587 729 - -
Trre5g01586 763 ProSiteProfiles Protein kinase domain profile. 503 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre5g01586 763 CDD PAN_AP_plant 340 422 - -
Trre5g01586 763 Coils Coil 462 482 - -
Trre5g01586 763 Pfam PAN-like domain 341 409 IPR003609 -
Trre5g01586 763 Pfam Protein tyrosine and serine/threonine kinase 504 588 IPR001245 GO:0004672|GO:0006468
Trre5g01586 763 Pfam Protein tyrosine and serine/threonine kinase 590 717 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01586 Trre-Chr5 11582423 11585454 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g01586 450 759 Receptor kinase-like Gene Family AT4G23150 41.576 2.99e-78 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre5g01586 PK_Tyr_Ser-Thr 7e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01586 - - tpra:123915292 1337.78