Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01584 ATGGCCATTATTCTTCATACCTTTCCTTTAATTACCAAGTTATTATTAGTATTATTACTCTTCTCCAAAATTTCCTCTGCAATAGATACCATTACACAATCACAGTCACTTTCAGATGGAAGCACCTTGGTTTCTAAGGGTGACATATTTGAGTTGGGTTTCTTCAACCTTGGTAATTCCACAAACCGCTATGTTGGAATTTGGTACAAAAATATCCCTGTTAGAAGAGTTGTTTGGGTTGCCAACCGTGACAACCCAATCAAAGACAATTCTAGCAAGTTGATCATAAGTCGAGAGGGAAACCTTGTGCTTCTAAATCAAAATCAAACTCTTCTATGGTCAACAAAAACAATAACAAAAGTTGCAATTTCAAGTCCAGTTGTGCATCTTTTCGACAATGGAAATTTAGTACTTAAAAACAGGAAGCAGAACAACACTGATGACAATTTTCTGTGGCAAAGTTTTGATTATCCCTGTGATACAATATTACCAGGGATGAAGGTGGGATTGGACAAGAAAAAGAGTCTTGATAGGAAATTTGTTGCATGGAAAAATTGGGACGATCCGTCTTCAAGTGACTTTACTTCAGCTTTGGTACTAACTCCTAATCCTGAAAGTTTTATTTGGAAAGGTTCAACAAAACTCTACAGAACTGGACCATGGACCGGTCCTCGATCAAGTGGTGTAGTTGGATTGATTGAAAACCAACTTTATGATTATGAGTTTGTCAACAATGAAGATGAAGTGTATTATATGTTCACACTGAAGAACAGTTTTGTTATTTCTATTGTTGTTTTGAACCAAACAAGTTCTGTTCGTCAACGCCTCATTTGGGTTGCACTTAATGGATCACCTATGTGTCAGTGTTTAGATGGATTTAAGCCTAAATCGCCAGAACAATGGAATGCAATGGACTGGAGACAAGGATGTGTGCGTAATGGTAATTGGAATTGTGGAGACAAAAATAGAGGCGAGTTTCAAAAAATTGTTGGGATGAAATTGCCAGATACTACACGTTCTTGGATTGATGAGAAAATGACACTTGAAGATTGCAAGAATAAATGTTTAAACAATTGTTCTTGTAGTGCTTACTCAAGTTTAGACTCAACTAGAACAAGTAGTGGTTGTTCTATCTGGTTTGATGATCTTATTGATCTCAGAGTTTCACAAAGTGGACAAGATCTATATATTCGAATGGACTCATCGGATACCGGTGATAAAAATGGGCAAGTCAAAAAAGTAATATCGACGGTTTCAATTCTAGTTTCAGTAGTTCTTGTGATGTTATTAGCACTCACCTACATATGTATAACAAAGGCGAAGAATAAAAGGGAAATTGAGAAAACCACAAGGTCAGAAGAGAAAGAAGAAGACACACATGAAGATTTTGAACTACCTATTTTTGATCAAGCTACAATACTTCAGGCAACAAATAACTTCTCTTTTGACAACAAGCTCGGTGAGGGTGGTTTTGGACCGGTATACAAGGGTACATTGCTCAATGGACAAAAAATTGCAGTCAAAAGGCTTTCAAGGAGTTCTGGTCAAGGACTTAAAGAGTTTAAAAATGAAGTTATATTATGTGCTAAACTTCAACACCGAAATCTTGTTAAAGTTGTTGGTTGTTGTATTGAAGGTGAGGAAAAAATGTTAATCTATGAGTACATGTCCAACAAAAGTCTCGATTCATTTCTTTTTGATTTTGGCATGGTTAGAATGTGCGGAGGTGATCAAATTGAGGGGAGAACAAACAGAATAGTAGGCACATATAACGGCTATATGGCACCAGAATACGCAGTTGATGGATTATTCTCTATAAAATCAGATATATTTAGCTTTGGCGTATTATTATTAGAAATTATGAGTGGAAAGAAAAATAGAGCACTTAGCTACGAGGAACAAGATCATAATCTTATTGGATATGCATGGAGGTTGTGGAAAGAGGGCACACCACTCACATTGATCGACAATTATTTAAGGAATTCATGTATTGAATCTGAAGCATTACGTTGCATTCAAATTGGTCTACTATGCCTACAACATCATCCTGATGATAGACCAAACATGACATCCATAGTTATCATGATGACTAGTGGAAATATTTTACCAAAACCAAAAGAGCCTGGGTTGTTAATTAAAAAGTTCTCAGTTAATGGAGAACCTTCTTCTGAAAGACAAATATTTTCTTCGACAAATGAAGTTACTATCTCACTAGTAGACGCTAGATAG 2229 0.3607 MAIILHTFPLITKLLLVLLLFSKISSAIDTITQSQSLSDGSTLVSKGDIFELGFFNLGNSTNRYVGIWYKNIPVRRVVWVANRDNPIKDNSSKLIISREGNLVLLNQNQTLLWSTKTITKVAISSPVVHLFDNGNLVLKNRKQNNTDDNFLWQSFDYPCDTILPGMKVGLDKKKSLDRKFVAWKNWDDPSSSDFTSALVLTPNPESFIWKGSTKLYRTGPWTGPRSSGVVGLIENQLYDYEFVNNEDEVYYMFTLKNSFVISIVVLNQTSSVRQRLIWVALNGSPMCQCLDGFKPKSPEQWNAMDWRQGCVRNGNWNCGDKNRGEFQKIVGMKLPDTTRSWIDEKMTLEDCKNKCLNNCSCSAYSSLDSTRTSSGCSIWFDDLIDLRVSQSGQDLYIRMDSSDTGDKNGQVKKVISTVSILVSVVLVMLLALTYICITKAKNKREIEKTTRSEEKEEDTHEDFELPIFDQATILQATNNFSFDNKLGEGGFGPVYKGTLLNGQKIAVKRLSRSSGQGLKEFKNEVILCAKLQHRNLVKVVGCCIEGEEKMLIYEYMSNKSLDSFLFDFGMVRMCGGDQIEGRTNRIVGTYNGYMAPEYAVDGLFSIKSDIFSFGVLLLEIMSGKKNRALSYEEQDHNLIGYAWRLWKEGTPLTLIDNYLRNSCIESEALRCIQIGLLCLQHHPDDRPNMTSIVIMMTSGNILPKPKEPGLLIKKFSVNGEPSSERQIFSSTNEVTISLVDAR 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01584 742 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 445 555 - -
Trre5g01584 742 Pfam S-locus glycoprotein domain 216 275 IPR000858 GO:0048544
Trre5g01584 742 SMART blect_4 34 158 IPR001480 -
Trre5g01584 742 PIRSF SRK 277 567 IPR024171 GO:0004674
Trre5g01584 742 PIRSF SRK 567 742 IPR024171 GO:0004674
Trre5g01584 742 PIRSF SRK 1 282 IPR024171 GO:0004674
Trre5g01584 742 Pfam Protein tyrosine and serine/threonine kinase 567 693 IPR001245 GO:0004672|GO:0006468
Trre5g01584 742 Pfam Protein tyrosine and serine/threonine kinase 481 565 IPR001245 GO:0004672|GO:0006468
Trre5g01584 742 Gene3D - 22 155 IPR036426 -
Trre5g01584 742 Gene3D Transferase(Phosphotransferase) domain 1 552 699 - -
Trre5g01584 742 CDD PAN_AP_plant 317 398 - -
Trre5g01584 742 Pfam D-mannose binding lectin 77 184 IPR001480 -
Trre5g01584 742 Pfam PAN-like domain 318 386 IPR003609 -
Trre5g01584 742 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 189 IPR036426 -
Trre5g01584 742 ProSiteProfiles Protein kinase domain profile. 480 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre5g01584 742 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 24 155 - -
Trre5g01584 742 Gene3D Hepatocyte Growth Factor 319 399 - -
Trre5g01584 742 SMART ntp_6 321 399 IPR003609 -
Trre5g01584 742 CDD B_lectin 34 158 IPR001480 -
Trre5g01584 742 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 575 701 - -
Trre5g01584 742 ProSiteProfiles PAN/Apple domain profile. 318 400 IPR003609 -
Trre5g01584 742 Gene3D Phosphorylase Kinase; domain 1 437 551 - -
Trre5g01584 742 ProSiteProfiles Bulb-type lectin domain profile. 28 151 IPR001480 -
Trre5g01584 742 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 15 687 - -
Trre5g01584 742 SUPERFAMILY Protein kinase-like (PK-like) 463 703 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01584 Trre-Chr5 11570552 11575125 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g01584 427 713 Receptor kinase-like Gene Family AT3G45860 40.751 2.62e-73 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre5g01584 PK_Tyr_Ser-Thr 4.2e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01584 - - tpra:123915292 1075.08