Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01583 ATGTTACTATTAGTATTATTACTCTTCTCCAAAATTTCCTCAGCAATAGATACCATTACACAATCACAGTCACTTTCAGAAGGAAGCACCTTGGTTTCCAAGGGTGACATATTTGAGTTGGGTTTCTTCAACCTCGGTAATTCCACAAACCGCTATGTTGGAATTTGGTACAAAAATATCCCTGTTAGAAGAGTTGTTTGGGTTGCCAACCGTGACAACCCAATCAAAGACAATTCTAGCAAGTTGATCATAAGTCGAGAGGGAAACCTTGTGCTTCTAAATCAAAATCAAACTCTTCTATGGTCAACAAACATAACAACAAAGGTTGCAATTTCAAGTCCAATTGTGCAACTTTTGGACAATGGAAATTTAGTACTTAAAAAGGAGAAGCAAAACAACACTGATGAAAATTTTCTATGGCAGAGTTTTGATTATCCTTGTGATACAATATTATCAGGAATGAAGGCGGGATATGACAAAAAAAATGGTCTTGATAGGAAACTCGTTGCATGGAAAAATTGGGATGATCCATCTTCAAGTGACTATACTTCAACTATGGTACTAACTCCTAATCCCGAAAGCTTTATTTGGAAAGGCTCGACAAAACTCTACCGAACAGGACCATGGACTGGTCGTCGATCTAGTGGAGTAGTTGGATTGACAGAAAATCCACTTTATGATTATGATTTTGTCAACAATGAAGATGAAGTGTATTATATGTTCAAACTCAAGAATAGTTCTGTTGTTTCGATAGTTGTTTTGAACCAAACGACTTCTCTTCGTCAACGTCTCATTTGGATTTCAGAATCCAAAACATGGAATGTATACCAAATTTTACCACAAGATAGATGTGATGTATATAATGTTTGCGGGGAAAATGGGCTATGCGCGCTGAATGAATCTCCTATGTGCCGGTGTTTAGATGGATTTAAGCCTAAGTCGCTACAACAATGGAATGTAATGGATTGGAGACAAGGATGTGTGCGTAATGGCAATTGGAGTTGTGGGATCAAAGATATAGACAAATTCAAAAGAATTGTTGGGGTGAAATTGCCAGATACTACATATTCTTGGATTGATGAGAAAATGACACTTAAAGATTGTAAGGCTAAATGCTTAGAAAATTGTTCGTGTAGTGCTTACTCAAATTTAGACTCAACCGGAAGAGGTAGTGGTTGTTCTATATGGTTTGGTGATCTTGTTGATCTTAGAATTTCACAAAGTGGACAAGACCTATATGTTCGAATAGACTCATCAGATATTGGTAATAAAAATGGACAAAGAAAAAAAATAGTATTGGTAGTTTCAATTACAATTTCAGTAGTCCTTGTGGTGTTATTGGCATTCACCTACATATCTATAACAAAGGCGAAGAATAAAAAGAAATTAAAGAAAACAACAAAGTCAGAAGAGAAAGAAGAAGATATACATGAAGATTTTGAGCTTCCTATCTTTGATCAACGTACTATACTGAAAGCAACAAATAATTTCTCTTTTGACAACAAGCTCGGCGAAGGTGGTTTTGGACCGGTATACAAGGGTATATTGCTCGATGGTGAGGAGAAAATGTTGATTTATGAATACATGCCCAACAAAAGTCTCGATTCATTTCTATTTGATCCATTTCAAAACGATGATATGAATCCCAAAATTTCCGACTTTGGCATGGCTAGAATGTGTGGAGGTGATCAAATTGAGGGGAGAACAAACAGAATAGTCGGCACATACGGCTATATGGCACCAGAATATGCTTTTGATGGATTATTCTCTACAAAATCAGATGTATTTAGCTTTGGCGTATTATTGTTGGAAATTATCAGTGGAAAGAAAAATAGAGCACATAGTTACCAGGACCACGATCATAATCTTATTGGATATGCCTGGAGGTTGTGGAAAGAGGGCATACCACTCACATTGATGGACGATTATTTAAGGAATTTATCTATTGAATCTGAAGTTGTACGTTGCATTCAAATTGGTCTACTATGCCTACAACATAACCCCGATGATAGGCCAAACATGACATCCGTAGTTGTGATGATGAGTAGTGAAAATACTTTGCCAAAACCAAAGGAACCTGGTTTGTTAATTAAAAGATTCTCAGTTGATGGAGAACCTTCTTCTGAAAGACAAACATCTTCTTCAACCAATGAAATAACTATCTCACTGGTAGACGCTAGATAG 2184 0.3649 MLLLVLLLFSKISSAIDTITQSQSLSEGSTLVSKGDIFELGFFNLGNSTNRYVGIWYKNIPVRRVVWVANRDNPIKDNSSKLIISREGNLVLLNQNQTLLWSTNITTKVAISSPIVQLLDNGNLVLKKEKQNNTDENFLWQSFDYPCDTILSGMKAGYDKKNGLDRKLVAWKNWDDPSSSDYTSTMVLTPNPESFIWKGSTKLYRTGPWTGRRSSGVVGLTENPLYDYDFVNNEDEVYYMFKLKNSSVVSIVVLNQTTSLRQRLIWISESKTWNVYQILPQDRCDVYNVCGENGLCALNESPMCRCLDGFKPKSLQQWNVMDWRQGCVRNGNWSCGIKDIDKFKRIVGVKLPDTTYSWIDEKMTLKDCKAKCLENCSCSAYSNLDSTGRGSGCSIWFGDLVDLRISQSGQDLYVRIDSSDIGNKNGQRKKIVLVVSITISVVLVVLLAFTYISITKAKNKKKLKKTTKSEEKEEDIHEDFELPIFDQRTILKATNNFSFDNKLGEGGFGPVYKGILLDGEEKMLIYEYMPNKSLDSFLFDPFQNDDMNPKISDFGMARMCGGDQIEGRTNRIVGTYGYMAPEYAFDGLFSTKSDVFSFGVLLLEIISGKKNRAHSYQDHDHNLIGYAWRLWKEGIPLTLMDDYLRNLSIESEVVRCIQIGLLCLQHNPDDRPNMTSVVVMMSSENTLPKPKEPGLLIKRFSVDGEPSSERQTSSSTNEITISLVDAR 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01583 727 Pfam PAN-like domain 338 403 IPR003609 -
Trre5g01583 727 SUPERFAMILY Protein kinase-like (PK-like) 480 688 IPR011009 -
Trre5g01583 727 Gene3D Transferase(Phosphotransferase) domain 1 530 691 - -
Trre5g01583 727 SMART ntp_6 338 416 IPR003609 -
Trre5g01583 727 SMART blect_4 22 146 IPR001480 -
Trre5g01583 727 MobiDBLite consensus disorder prediction 704 727 - -
Trre5g01583 727 PIRSF SRK 1 521 IPR024171 GO:0004674
Trre5g01583 727 PIRSF SRK 517 545 IPR024171 GO:0004674
Trre5g01583 727 PIRSF SRK 543 727 IPR024171 GO:0004674
Trre5g01583 727 ProSiteProfiles PAN/Apple domain profile. 335 417 IPR003609 -
Trre5g01583 727 Pfam Domain of unknown function (DUF3403) 682 727 IPR021820 GO:0004674
Trre5g01583 727 Pfam D-mannose binding lectin 65 172 IPR001480 -
Trre5g01583 727 CDD B_lectin 22 146 IPR001480 -
Trre5g01583 727 ProSiteProfiles Protein kinase domain profile. 381 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre5g01583 727 Gene3D Phosphorylase Kinase; domain 1 454 527 - -
Trre5g01583 727 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 12 143 - -
Trre5g01583 727 SUPERFAMILY alpha-D-mannose-specific plant lectins 65 177 IPR036426 -
Trre5g01583 727 ProSiteProfiles Bulb-type lectin domain profile. 16 139 IPR001480 -
Trre5g01583 727 Gene3D Hepatocyte Growth Factor 336 416 - -
Trre5g01583 727 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 561 686 - -
Trre5g01583 727 MobiDBLite consensus disorder prediction 706 727 - -
Trre5g01583 727 CDD PAN_AP_plant 334 416 - -
Trre5g01583 727 Pfam Protein tyrosine and serine/threonine kinase 547 678 IPR001245 GO:0004672|GO:0006468
Trre5g01583 727 Gene3D - 10 143 IPR036426 -
Trre5g01583 727 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 2 672 - -
Trre5g01583 727 Pfam S-locus glycoprotein domain 204 314 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01583 Trre-Chr5 11564139 11569209 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g01583 457 725 Receptor kinase-like Gene Family AT4G23150 37.709 1.78e-65 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre5g01583 PK_Tyr_Ser-Thr 3e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01583 - - tpra:123915292 1085.09