Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01581 ATGGCCATTATTCTCCATACCCTTCCTTTAATTACAAAGTTACTACTAGTAGTATTATTACACTTCTCCAAAATTTCCTCTGCAATAGATACCATTACACAATCACAGCCACTTTCAGATGGAAGCACCTTGGTTTCTAAGGGTGACATATTTGAGTTGGGTTTCTTCAATCTTGGTAATTCCACAAACCGCTATGTCGGAATTTGGTATAAAAATATCCCGGTTAGAAGAGTTGTTTGGGTTGCCAACCGCGACAACCCAATCAGAGACAATTCTAGCAAGTTGATCATAAGTTCAGATGGAAACCTTGTGCTTCTAAATCAAAATCAAACTCTTCTATGGTCAACAAACATAACAACAAAGGTTGCGATTTCAAGTCCAATTGTGCAACTTTTGGACGATGGAAATTTAGTACTTAAAAACGAGAAGCAGAACAACGTTGACGAAAATTTTCTATGGCAGAGTTTTGATTATCCTAGTGATACAATATTACCGGGTATGAAGGCGGGATGGGACAAAAAAAAGGGCCTCGATAGGAATATCGTTGCATGGAAAAATTGGGACGATCCGTCTTCGAGTGACTATACTTCAGCTATGGTATTAACTCCTAATCCTGAAAGCTTTATTTGGAAAGGCTCAACAAAAGTCTATAGAACAGGACCATGGACTGGTCCTCGATCTAGCGGAATAGTTGGATTGACAGAAAATCCAATTTATAATTACGAGTTTGTCAACAATGAAGATGAAGTGTATTATCTATTCACACTCAAGAATAGTTCAGTTGTTTCGATAGTTGTTTTGAACCAAACGACTTCTGTTCGTCAACGTCTCATTTGGATTTCAGAATCCAAAACATGGAATGCTTACCTAACATTGCCACAAGATAATTGTGATGTATATAATATTTGTGGAAAAAATGGGCTTTGTACGCTTAATGAATCACCTATATGTCAATGTTTAGATGGATATAAGCCGAAGTCGCCACAACAATGGAATGCAACAGATTGGAGACAAGGATGTGTGCGCAATGGTAATTGGAGTTGTGGCGTAAAAAATCGAGATGGGTTTAAGAGAATTGTTGGGATGAAATTGCCGGATACTACATATTCTTGGATTGATGAGAAAATGACACTTGAAAAATGCAAGGCTAAATGCTTGGAAAATTGTTCATGTAGTGCTTACTCAAATTTAGACTCAACTGGAAAAGGTCTTGGTTGTTCTATTTGGTTTGGTGATCTTAATGATCTTAGAGTTTCACAAAGTGGACAAGACCTATATATTCGAATAGACTCATCAGATATCGATGATAAAAATGGACAAATAAAAATAGTATTGGCAGTTTCAATTCCAGTTTCTGTAGTCCTTGTGATGGTTTTGGTCTTCACCTACATATATATGACAAAGGCAAAGTATAAAAAGATAGCGACAACATCAGAAGTGAAAGAAGATAAATATGATGATTTTGAGCTTCCTATCTTTGATCAAGTTACAATACTCAAGGCAACAAATAACTTCTCTGTTGACAACAAGCTCGGTGAAGGTGGTTTTGGACCAGTATATAAGGGTACATTGCTCGATGGACAAGAAATTGCTGTCAAAAGACTTTCACAGAGTTCTGGTCAAGGAATTAAAGAATTCAAAAATGAAGTTATATTATGTGCTAAACTTCAACACCGAAATCTTGTTAAAGTTGTTGGTTGTTGTATCGAAGGAGTGGAGAAAATGTTGATCTACGAATACATGTCCAACAAAAGTCTCGATTCAATTCTTTATGATCCATTTCAAAATTTTGGCATGGCTAGAATGTGTGGAGGTGATCAAATTGAGGGGAGAACAAACAGAATAGTAGGCACATATGGCTATATGGCACCAGAATATGTTATTGATGGATTATTCTCCATAAAATCAGATGTATTTATCTTTGGTGTATTATTATTAGAAATTATCAGTGGCAAGAAAAATAGATCAGATAGCTATCAAGAGCACGATCAGAATCTTATTGGATATGCGTGGAGGTTGTGGAAAGAAGGCAAACCACTCAATTTGGTTGATGATTATTTGAGGAATTCATGTATTGAATCTGAAGCATTACGTTGCATTCAAATTGGTCTACTATGCCTACAACATCATCCTGATGATAGACCAAACATGACATTTGTAGTTGTGATGCTAAGTAGCGAAAGTACTTTACCGAAACCAAAGGAGCCTGGTTTATTAGTTACAAGGTTCTCAGTTGATGGAGAACCTTCTGCTGAAAGGCATACATCTTCTTCCTTTAATGAAATAACTATTTCAAGAATAGATGCTAGATAG 2313 0.3632 MAIILHTLPLITKLLLVVLLHFSKISSAIDTITQSQPLSDGSTLVSKGDIFELGFFNLGNSTNRYVGIWYKNIPVRRVVWVANRDNPIRDNSSKLIISSDGNLVLLNQNQTLLWSTNITTKVAISSPIVQLLDDGNLVLKNEKQNNVDENFLWQSFDYPSDTILPGMKAGWDKKKGLDRNIVAWKNWDDPSSSDYTSAMVLTPNPESFIWKGSTKVYRTGPWTGPRSSGIVGLTENPIYNYEFVNNEDEVYYLFTLKNSSVVSIVVLNQTTSVRQRLIWISESKTWNAYLTLPQDNCDVYNICGKNGLCTLNESPICQCLDGYKPKSPQQWNATDWRQGCVRNGNWSCGVKNRDGFKRIVGMKLPDTTYSWIDEKMTLEKCKAKCLENCSCSAYSNLDSTGKGLGCSIWFGDLNDLRVSQSGQDLYIRIDSSDIDDKNGQIKIVLAVSIPVSVVLVMVLVFTYIYMTKAKYKKIATTSEVKEDKYDDFELPIFDQVTILKATNNFSVDNKLGEGGFGPVYKGTLLDGQEIAVKRLSQSSGQGIKEFKNEVILCAKLQHRNLVKVVGCCIEGVEKMLIYEYMSNKSLDSILYDPFQNFGMARMCGGDQIEGRTNRIVGTYGYMAPEYVIDGLFSIKSDVFIFGVLLLEIISGKKNRSDSYQEHDQNLIGYAWRLWKEGKPLNLVDDYLRNSCIESEALRCIQIGLLCLQHHPDDRPNMTFVVVMLSSESTLPKPKEPGLLVTRFSVDGEPSAERHTSSSFNEITISRIDAR 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01581 770 Pfam PAN-like domain 348 416 IPR003609 -
Trre5g01581 770 CDD B_lectin 35 159 IPR001480 -
Trre5g01581 770 Pfam S-locus glycoprotein domain 217 327 IPR000858 GO:0048544
Trre5g01581 770 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 190 IPR036426 -
Trre5g01581 770 SUPERFAMILY Protein kinase-like (PK-like) 489 731 IPR011009 -
Trre5g01581 770 PIRSF SRK 595 770 IPR024171 GO:0004674
Trre5g01581 770 PIRSF SRK 1 596 IPR024171 GO:0004674
Trre5g01581 770 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 604 729 - -
Trre5g01581 770 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 25 156 - -
Trre5g01581 770 SMART blect_4 35 159 IPR001480 -
Trre5g01581 770 ProSiteProfiles PAN/Apple domain profile. 348 430 IPR003609 -
Trre5g01581 770 Pfam D-mannose binding lectin 78 185 IPR001480 -
Trre5g01581 770 Gene3D Transferase(Phosphotransferase) domain 1 585 734 - -
Trre5g01581 770 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 16 715 - -
Trre5g01581 770 Pfam Domain of unknown function (DUF3403) 725 770 IPR021820 GO:0004674
Trre5g01581 770 Gene3D Hepatocyte Growth Factor 347 426 - -
Trre5g01581 770 Gene3D Phosphorylase Kinase; domain 1 464 580 - -
Trre5g01581 770 ProSiteProfiles Bulb-type lectin domain profile. 29 152 IPR001480 -
Trre5g01581 770 ProSiteProfiles EGF-like domain profile. 293 329 IPR000742 -
Trre5g01581 770 SMART ntp_6 351 429 IPR003609 -
Trre5g01581 770 Gene3D - 23 156 IPR036426 -
Trre5g01581 770 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 470 580 - -
Trre5g01581 770 ProSiteProfiles Protein kinase domain profile. 505 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre5g01581 770 Pfam Protein tyrosine and serine/threonine kinase 596 722 IPR001245 GO:0004672|GO:0006468
Trre5g01581 770 Pfam Protein tyrosine and serine/threonine kinase 507 591 IPR001245 GO:0004672|GO:0006468
Trre5g01581 770 CDD PAN_AP_plant 347 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01581 Trre-Chr5 11552188 11557364 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g01581 436 770 Receptor kinase-like Gene Family AT4G23150 39.848 6.96e-85 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre5g01581 PK_Tyr_Ser-Thr 8.7e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01581 - - tpra:123915292 1152.5