Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01529 ATGGAATTTCTATCTTCTATTGTTGGAACAGTAGCAGAACATACTGTTGTGCCTATTGGACGTCAAGCAAGTTACTTGATATTCTACAAAGGCAATTTCAGTATGTTAGCGGTTCATGTTAAAGACCTTGAGGCTGCAAAAGAAAGAATGACCCATTCAGTTGAAGAAGAAAAGAGAAACGGTAAAAATATTGAAACAGATGTGATGAACTGGTTAGAGAAAGTTAATGAGCTCATTGAAAAGGCAAATCAGCTTCAGAGTGATCCTGGCCATGCCAATGCTAAGTGCTCAGCATGGCCGTTCCCCAATTTGATTTTACGTCATCAACTTAGTAGGAAGGCCACAAAAATTGTAAAAGATGTTTTTGAAGTTCAAGAAAAAGGAAAGTTTGATCGAATTGGTTACCTTCCCAACCTAGATGGAGAAGCCTCCTTCTCCTCAACAAGAGGTGGTGAAAATTATGAGACAAGGGAATCACTGAAAGAGAACATTATGAAGGCACTAACACACCATAGTTCATGCAACATTGGGGTCTATGGGTTGGGTGGGGTGGGTAAGACAACTCTGCTGGAGGAAGTTTTTGAAATGTCTAAGCAACAGAAATTGTTTGATACAGTTGTTACAGCCAATGTAACAAAAAATCCAGACATTAAAACAATTCAAGGGGAGATTGCAGATTTGTTGGGTCTACGATTCGATGAGGAGACTATTCTTGGCAGAGCACGTCGCCTACGAGAAAGAATCATGATGGAAAATAATATCCTTGTTGTTCTAGATGATATATGGACCATACTTGATTTGAAGAAAGTTGGAATTCCATTTGGTAGTGAACATAATGGTTGCAAATTGTTGATGACATCTAGAAATCAAGATGTGTTGTTCCAAATGGATGTTCCAAAGGATTTCACTTTCAAACTTGGACTTATGAGTGAAAATGAGACATGGACCTTGTTTCAATTTATGGCCGGTGATGTGGTTAAAGATAGCAATCTGAAAGGTGTAGCAATTCAAGTTGCCCAAAAATGTGAAGGTTTGCCTCTTATGGTAGTGACGGTAGCCCGTGCAATGAAAAATAAGAGGGATGTTCAATCTTGGAAAGATGCATTAAGGAGATTAGAAAGTGGTTCTCATACAATTTCTTCTGCTTTGAAATTAAGTTACGACTCATTGGAGAGTGATGAAATGAGGGATGTCTTCTTGCTTTTTGCATTATTTCCATATGAGAAGGTACATTACTTTCTAAAAGTTGCAATGGGTTTGGATATATTAAAGGATATTAAGAATGTGGATGATGCAAGAAACGGTCTCTATTCAATAATCCATTCTTTGGAGGCGACTTGTTTGCTTGAAATTAAAACAAATGGAAATATCCAAATGCATGACTTTGTTCGTGATTTTGCTCTCTTCATAGCACATACAGACAAACATGTATTTCTAAAAAAACAATCAGATAAGGAATGTCCAACCAAAGATTTTTTAACAAGGTGCACACAGGTAGTTCTAGATAATTGTATGCACGAGCTTCCTCAAATGATTGATTGTCCAAACATTAAGTTTTTCTGCTTGTCCAGTGGAAATCGTTCATTAGAAATCCCTGATAATTTTTTTGAGGGTATGGGAAGCCTTAGAGTCCTAGATTTAACATCTCTGAACTTGTCTTCATTACCCACTTCGTTTCGGTTCCTAACCAGCCTTCAAACATTGTGTTTGAATTTTTGCATTTTGGAAAATATGGGTGAAATAAATGCATTGCAAAATTTAAAAATTCTATGCCTTTGGGGTTCTTCAATGACCAAGTTGCCAAGAGAAATAGGGCAATTGACTCAATTAAGAATGCTTGATTTGAGCAAATCAGGAATAGAAGTAATCCCGCCCAACATTTTATCAAGCTTGACTAACCTGGAGGAGTTGTACATGGGCAATACCTTTGTTAATTGGGAAAATGTCAATTCGACAGCTCAAAACAAAAATGCTAGCATTGCTGAGCTTCGAAAACTACCCAACTTGACAACTCTAGAATTACAAATTCGCGAGTTGCCAAGGGACTTGCAAACAGTGTTTGAGAAGTTGGAAAGGTATAAAATAGCTATTGGTGATGTATGGGAATGGCCTGACATTGTGAATGGAACCTCAAAAACATTGATGCTCAAACTTGGTACTAACATACATTTGGAGCACGGAATTAAACCACTGATTATGGGTGTTGAGAATTTGTACTTGGATGATGTTGATGGAATTCAAAATGTGGTTTATCAACTAAATAGAGAAGGATTTCCATCGCTGAAACATCTCCACATCCAAAATAATGCAAACATGAAGCATATTGTTGACTCTCAAGAGAGGAATCAATTGGATGTGTTTCCCATCTTGGAAACTCTAGTACTTTATAATCTTAAAAACTTGGAGCATATATGTCTTGGTCCACTTTCAATTGCTTCTTTTGGAAGTCTTAGTGTTATCAAAGTAAAAAATTGTGTCCAATTGAAATATCTTTTCTCCTTTACATTGGTTAAAGAACTTTCTCGCCTTTCAGAGATTGAAGTTTGTCATTGCAATTCTATGAAGGAGATAGTGCTCGGAGACAACAATTCAAGTGCATCAATGGTTTTTCCATTCCATTCTTTGACTTTAGAACATTTGGAGACACTTCAGAATTTCTTCTCCAGAAACAAGCAAAGGCATCAATTGTTAGATCCTTCTGTGTCAACACCATTGTTTAATGCTCAGGTTGCATTTCCTAATTTGGAAACTCTAAAATTGAGCTCACTCAATTTGAATAAAGTTTGGGATGACAGTCATCAATCTATGTGCAACTTAACTAGCTTGATTGTGGAGAATTGTGGTGGGTGGAAGTACTTATTCTTGTCTTCTATGGTTGGAAGTTTTAAGAACCTCAAACACCTTGAAATAAGTAATTGTCCATTGATGGAGGAGATAATAGCTAAAGAAGAAAGAAACAATGAAATTGAAGAGGTTAATTTTTTGAAATTAGAGAAAATCACTTTGAAGGACATGGACAACTTGAACACAACATGGCACCGCCAATTTGAAACAGTGAAGATGTTGCAAGTGAGGAATTGTAAGAAAATTGTTGTGGTTTTTCCTTCTTCAATGCAAGAAACATATAACAAGCTAGAGATGTTGGAGGTTACAGATTGTGCTTTAGTAGAAGAGATATTTGAATTGAGTTTCAATGAAAATAATAGCAGTGTAGAGAATGCAACACATTTGAAAGTTGTTCTAGATGGATTGCCGAAACTGAAAAATATATGGAGTGGGGATTGTCACAGAATTCTTAGTTTTCAAATTCTTATATTTGTAAAACTAAAAAACTGTGCAAGCTTGGAGTATCTATTACCACTTTCTATAGCCACTCATTGTTCACATCTCAAAGAACTTCATATAGAAAGTTGTGTAAACATGAAGGAAATTGTCGCAGAAGAGGAAGAAACTCGATTGAGTGCAACTCCCACATTTGAGTTTAATCAACTAAGTTCGTTATTGCTTTTGAACTTAATTAAACTCAATGGTTTCTATGCTAAAAAGCATACAGTAGCATGTCCATCTTTGAAGGACATTGATGTTTACGGTTGTGCAAGGTTGAATTTGTACACAACTTTATCTACAAGAAACTCCAATTTTCAAGATAACAAACTCCCTGTTATAACGCAACAACCACCTTTCATTGTCGAAGAGGTGATTCCAAATTTGGAGAAGTTGAGAATAAATCACAAAGAAGCTAACGTGATATTGCAAGCCCAAAACTCAAGTGCCCTATTCACCAAACTGACATTTCTTGGTTTGTCCAAATATAATATTGAAGATGTTACATTTCCTTATTGGTTTCTTCAAAATGTGCACACTCTTGAGTCACTAGTTGTTGAATGGAGTTGCTTCAAGAAAATATTTCAAGATGAAGGACAAATAAGTGAGAAGAAGACTTACCCACAGCTCAAAAGTCTCACATTGTATCAATTACATAAGCTTCAACATATATGTGACGAAGGATTCCAAATTGATCCAGTTCTTGAGTTCCTTGAATACCTAGATGTTGATAATTGTTCTAGTTTGTTAAGTTTATTGCCTTCCTCCGCCACCCTTAATCATCTTGAATATTTGGAGATAACAAATTGCAATGGGTTAAAAAAATTAATTGCATCTCCTACGGCGCAAAATTTGGAAAAGCTCGCCTCACTGAAGATAAAAAACTGCAGTTCACTCAAAGAAATAATTACTGGAGAGGAAAATGTTGGCATTGCATTTATTAGTTTACAATTATTGATATTGGATTGTTTGCCAAGCCTCAACAAATTTTGTTCTAGTAAGTGCTTCTTGAAGTTTCCATTGTTGAAGACAGTAATTGTGAGGGAATGTCCTCGCATGAAGATTTTTTCAGAGGGAAACATAAGTACACCAAATCTTCGAAAAGTTAAAATTGCAGAAAATGATGAATGGCTTTGGAAGGGAAACCTAAATGATACAATAACCAGCATATTTCAAGATAAGGTGGCATTTGGTAGTTTTAAGCATTTAAAACTGTCTGAATATCCCGAGTTGAAAGAATCGTGGTATGGTCAACCTCAGCACAATGTATTTATGAGTCTGAAGTATCTAGTCGTTCATAAATGTGATTTTTTATCTGAGGTGCTCTTTCAACCAAATTTGCTAGAAATGCTAATGAAGTTGGAAGCATTAGATATCAAAGATTGCAATTCATTAGAAGCAATTTTTGATTTGAGAGATGAGTTTGAAAAAGAAATTCTTGTGAAGAATTCCACTCAGTTGAAGAAATTAAAACTATCGAATCTTCCAAAATTAAAGCATGTATGGAAGGAGGGCCAACATAACACCATGGGGTTTCAAAATTTAAGTGAAGTATCTGTTGTTTGTTGCACAAGCTTGAAAAGCCTCTTTCCGCTCTCAGTAGCTAGAGATTTGAAGCAAATTCAAAGTCTTGAAGTATGTGAATCTGGAATTGAAGAGATTGTTGGCAAGGAAGAAGGATTAAAGGAGATTGTTAAATTTGTGTTTCCTTATTTAACATTCATCAAACTTCACCATTTGGCCAAACTTAAGGCATTCTTTGGCGGAGTCCATTCTCTTCAATCTAAATCATTGAAAACGATCAACGTGCTCGGATGTCCAAAAATGGAGCTATTTAAGGCAGAGCCTTTGAGACACCAAGAAAGTACCAGAAATGATAAGCTCAATATCTCAACATATCAACCTATGTTCATGATTGAAGAGGTACTTAACAATGTGGAGACTTTGGATATGAATATTAAATATTTTGACATGATATTGCATAGCCAATATTCAGGGGTTCAATTCAACAAAGTCAAAAATATTGGTGTGAGTGAATGCTGCAATGAAGAAGTTACTTTTCCATGTTGGTTCTTGAAAAATGTTCCTAATTTAGAAAGCATATTAATCAAATGGAGTTCCTTCAGGGAGATATTTTCAGGTGAACAACTCATAAGTACGGAAAAGGAAACTCAAATTATCCCGCGACTCAAAGAGTTGAATTGTTGGTACATGGACAAGCTTCAATGTATATGCAAAGAAGGACTTCAAATGGACCCTGTTCTGCAATTTCTTGAAAGCATTGATGTTCATCAGTGTTCCAGTCTAGTAAAATTGGTGCCTTCTTCTGTTACCTTTAATTACTTGACCTACTTGGAGGTAACAAACTGCAATGGTTTGAAAGATTTGATAACATACTCAACAGCAAAGAGTCTTGTCAAACTTGAAACCATGAAGATTAAAATGTGTAATTGGCTTGAGGATATAGTCAACGGTAAAGAAGAAGAAGAAGATGAGATGACCAAGATTGAATTTTGCAATTTAAAATCTCTAGAACTGATTTCTTTACCAAGGCTCTGTGTATTTTCCTCATGCCCATGCCTCATTTTGTTTCCGTTGTTAGAAGACGTGGTTGTCAAGGAATGTCCTCGAATGGAACATTTTTCATTGGGAGTGACCAGCACAATATTTCTTAAACATATACAAATTGATGAAGAAAATCATTGGGAAGGCGACCTCAATGGAACAGTAAAGAAATTGTTTGATGACAAGGTTGCATTTCGTAAATTCAACCGTTTAGCCTTAGCCGACTACCCTGAGCTAAAAGATTTGTGGTATGGCCAGCATAATCACAATGTGTTTTGCAATCTGAAATCCCTAGTTGTGCAAAAATGTGATTTTTTATCACACGTACTTTTACCATCAAATGTAATGCAAACACTGCATGGATTGGAAGATTTAAAAGTAACAGACTGTGATTCATTAGAAGCAGTGTTTGATGTGAAAGATATGAAGTCTAGAGAGATATTGATAAAACAAAGCTCTCAGTTGAAAACATTGACTTTATCTAGTTTACCAAAATTGAAGCACATATGGAATGAGGATCCTCATGAAATTATCAGCTTTGGAAACTTATGCAAGGTGGAGGTTTATAACTGTCAAAGCTTGCTATATATCTTTCCATTGTCACTATGCCAAGATCTTGGACATCTTGAAATGCTTGATATAGAGTCTTGTGGAGTTGAGGAAATTGTAGAAATGGAAGAAGGATCAATGGAAATCAATTTTAATTTTCCACAACTGAATACATTGAGACTATATCTTTTGACAAACCTCAAGAACTTCTATCAGGGAAAGCATGCTTTAGATTGCCCTTGTTTGAAGATTTTTAATGTATACCGTTGTGAAGCATTAAGAATGTTTTCCTTCACCCATTTAGACTTCCAACAGCCTAACGCAGCGGGCGGAAATCCCACCATACCTCAACAAGCTCTATTTTCTATCGAAAAGTTGAGCCACAACGTGGGAGAACTGGCAATAAATTGCCCAGATGCAATTGAGATATTGAATCAAGAAAATGTCTTTCATAAAGTTAAATTTCTTCGTTTGCAATGCTTCAATGAAACTCCAACTATTTTTCTGAATGAATTGCATTCAACATTTCCTAATCTTGAAATGTTTCAAGTGCGTAATAGTTCTTTTGAAACATTGTTCCCCACTGAAGCAACCATTGGTCATTGCAATATGCAAATTTCAAATCAAATAAGAACTTTGTATCTATATGAATTGGAAAATCTCAAGCACATTTGGCAGGAAGACTTTCCATTATATCATCCTTTGCCTCAAGATCTTGAAATCCTATCTGCATGGAATTGTCCAAGTTTGATAAGCTTGGTACCATCGTCAACATCTTTCACAAATTTAACATTTTTGAAAGTGGAGAATTGCAAAGAGCTTTTTTATTTAATAACATCCTCAACAGCTAAAAGTCTTGTACAACTCTCAACATTAAAAATATTGAATTGTGAGAAGATGTTGGATGTTGTGAAGATTGATGAAGAAAAAGCAGAGGAAAACATCAAATTTGAAAATTTGGAATACTTGGAATTATCTTCTTTGCCAAGTTTTAGAAGCTTCTGCTATGAGAAACAAGCATTCATATTCCCATCTTTACTACGTTTCATTGTTAAAGGGTGCCCTCAAATGAAGATATTCTCATCAGGAGTCACAGTAGCACCATACCTGACAGAAATTGAAGTGGAAGAAGAAAAGATGAGATGGAAAGGTGATCTTAACACAACTATTGAACAATTGTTCATAGAAAAGGTACACAATTGTCTTTGTTAA 7650 0.3558 MEFLSSIVGTVAEHTVVPIGRQASYLIFYKGNFSMLAVHVKDLEAAKERMTHSVEEEKRNGKNIETDVMNWLEKVNELIEKANQLQSDPGHANAKCSAWPFPNLILRHQLSRKATKIVKDVFEVQEKGKFDRIGYLPNLDGEASFSSTRGGENYETRESLKENIMKALTHHSSCNIGVYGLGGVGKTTLLEEVFEMSKQQKLFDTVVTANVTKNPDIKTIQGEIADLLGLRFDEETILGRARRLRERIMMENNILVVLDDIWTILDLKKVGIPFGSEHNGCKLLMTSRNQDVLFQMDVPKDFTFKLGLMSENETWTLFQFMAGDVVKDSNLKGVAIQVAQKCEGLPLMVVTVARAMKNKRDVQSWKDALRRLESGSHTISSALKLSYDSLESDEMRDVFLLFALFPYEKVHYFLKVAMGLDILKDIKNVDDARNGLYSIIHSLEATCLLEIKTNGNIQMHDFVRDFALFIAHTDKHVFLKKQSDKECPTKDFLTRCTQVVLDNCMHELPQMIDCPNIKFFCLSSGNRSLEIPDNFFEGMGSLRVLDLTSLNLSSLPTSFRFLTSLQTLCLNFCILENMGEINALQNLKILCLWGSSMTKLPREIGQLTQLRMLDLSKSGIEVIPPNILSSLTNLEELYMGNTFVNWENVNSTAQNKNASIAELRKLPNLTTLELQIRELPRDLQTVFEKLERYKIAIGDVWEWPDIVNGTSKTLMLKLGTNIHLEHGIKPLIMGVENLYLDDVDGIQNVVYQLNREGFPSLKHLHIQNNANMKHIVDSQERNQLDVFPILETLVLYNLKNLEHICLGPLSIASFGSLSVIKVKNCVQLKYLFSFTLVKELSRLSEIEVCHCNSMKEIVLGDNNSSASMVFPFHSLTLEHLETLQNFFSRNKQRHQLLDPSVSTPLFNAQVAFPNLETLKLSSLNLNKVWDDSHQSMCNLTSLIVENCGGWKYLFLSSMVGSFKNLKHLEISNCPLMEEIIAKEERNNEIEEVNFLKLEKITLKDMDNLNTTWHRQFETVKMLQVRNCKKIVVVFPSSMQETYNKLEMLEVTDCALVEEIFELSFNENNSSVENATHLKVVLDGLPKLKNIWSGDCHRILSFQILIFVKLKNCASLEYLLPLSIATHCSHLKELHIESCVNMKEIVAEEEETRLSATPTFEFNQLSSLLLLNLIKLNGFYAKKHTVACPSLKDIDVYGCARLNLYTTLSTRNSNFQDNKLPVITQQPPFIVEEVIPNLEKLRINHKEANVILQAQNSSALFTKLTFLGLSKYNIEDVTFPYWFLQNVHTLESLVVEWSCFKKIFQDEGQISEKKTYPQLKSLTLYQLHKLQHICDEGFQIDPVLEFLEYLDVDNCSSLLSLLPSSATLNHLEYLEITNCNGLKKLIASPTAQNLEKLASLKIKNCSSLKEIITGEENVGIAFISLQLLILDCLPSLNKFCSSKCFLKFPLLKTVIVRECPRMKIFSEGNISTPNLRKVKIAENDEWLWKGNLNDTITSIFQDKVAFGSFKHLKLSEYPELKESWYGQPQHNVFMSLKYLVVHKCDFLSEVLFQPNLLEMLMKLEALDIKDCNSLEAIFDLRDEFEKEILVKNSTQLKKLKLSNLPKLKHVWKEGQHNTMGFQNLSEVSVVCCTSLKSLFPLSVARDLKQIQSLEVCESGIEEIVGKEEGLKEIVKFVFPYLTFIKLHHLAKLKAFFGGVHSLQSKSLKTINVLGCPKMELFKAEPLRHQESTRNDKLNISTYQPMFMIEEVLNNVETLDMNIKYFDMILHSQYSGVQFNKVKNIGVSECCNEEVTFPCWFLKNVPNLESILIKWSSFREIFSGEQLISTEKETQIIPRLKELNCWYMDKLQCICKEGLQMDPVLQFLESIDVHQCSSLVKLVPSSVTFNYLTYLEVTNCNGLKDLITYSTAKSLVKLETMKIKMCNWLEDIVNGKEEEEDEMTKIEFCNLKSLELISLPRLCVFSSCPCLILFPLLEDVVVKECPRMEHFSLGVTSTIFLKHIQIDEENHWEGDLNGTVKKLFDDKVAFRKFNRLALADYPELKDLWYGQHNHNVFCNLKSLVVQKCDFLSHVLLPSNVMQTLHGLEDLKVTDCDSLEAVFDVKDMKSREILIKQSSQLKTLTLSSLPKLKHIWNEDPHEIISFGNLCKVEVYNCQSLLYIFPLSLCQDLGHLEMLDIESCGVEEIVEMEEGSMEINFNFPQLNTLRLYLLTNLKNFYQGKHALDCPCLKIFNVYRCEALRMFSFTHLDFQQPNAAGGNPTIPQQALFSIEKLSHNVGELAINCPDAIEILNQENVFHKVKFLRLQCFNETPTIFLNELHSTFPNLEMFQVRNSSFETLFPTEATIGHCNMQISNQIRTLYLYELENLKHIWQEDFPLYHPLPQDLEILSAWNCPSLISLVPSSTSFTNLTFLKVENCKELFYLITSSTAKSLVQLSTLKILNCEKMLDVVKIDEEKAEENIKFENLEYLELSSLPSFRSFCYEKQAFIFPSLLRFIVKGCPQMKIFSSGVTVAPYLTEIEVEEEKMRWKGDLNTTIEQLFIEKVHNCLC 2549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01529 2549 SUPERFAMILY RNI-like 1590 1849 - -
Trre5g01529 2549 Gene3D - 146 301 IPR027417 -
Trre5g01529 2549 PRINTS Disease resistance protein signature 342 356 - -
Trre5g01529 2549 PRINTS Disease resistance protein signature 248 262 - -
Trre5g01529 2549 PRINTS Disease resistance protein signature 960 976 - -
Trre5g01529 2549 PRINTS Disease resistance protein signature 175 190 - -
Trre5g01529 2549 SUPERFAMILY L domain-like 458 877 - -
Trre5g01529 2549 Gene3D Ribonuclease Inhibitor 482 983 IPR032675 -
Trre5g01529 2549 Gene3D - 308 391 IPR042197 -
Trre5g01529 2549 SUPERFAMILY RNI-like 1160 1411 - -
Trre5g01529 2549 Coils Coil 68 88 - -
Trre5g01529 2549 Gene3D Ribonuclease Inhibitor 2288 2546 IPR032675 -
Trre5g01529 2549 SUPERFAMILY RNI-like 1853 2181 - -
Trre5g01529 2549 Gene3D Ribonuclease Inhibitor 1470 1643 IPR032675 -
Trre5g01529 2549 Gene3D Ribonuclease Inhibitor 1208 1413 IPR032675 -
Trre5g01529 2549 Gene3D Ribonuclease Inhibitor 1734 1936 IPR032675 -
Trre5g01529 2549 SUPERFAMILY RNI-like 1344 1715 - -
Trre5g01529 2549 Pfam NB-ARC domain 158 390 IPR002182 GO:0043531
Trre5g01529 2549 Coils Coil 40 60 - -
Trre5g01529 2549 SUPERFAMILY RNI-like 2296 2503 - -
Trre5g01529 2549 Gene3D Ribonuclease Inhibitor 984 1207 IPR032675 -
Trre5g01529 2549 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 401 IPR027417 -
Trre5g01529 2549 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1246 1475 - -
Trre5g01529 2549 Gene3D Ribonuclease Inhibitor 2027 2265 IPR032675 -
Trre5g01529 2549 SUPERFAMILY L domain-like 798 1059 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01529 Trre-Chr5 11050062 11059856 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g01529 176 680 WRKY Transcription Factor Family AT5G45050 25.185 5.95e-11 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01529 - - tpra:123924644 3497.6