Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01515 ATGGATGATAATTTCATTGTGAGTGTGACAAATGAAGAGGTTGTGGCTGCAGTGTTACCAATACAAGAACATTGGCTCCCACTCTCTAATCTTGACTTACTTCTACCTAAAGTAGATGTTGGAGTGTTCTTTTGTTACAAGAATCCTATGTTGTTATCAACTTCTACAACATTATTAACCTTTGAATCTATGGTTGTGTCTCTTAAGAAGGCATTAGCTAAGGTTTTGGTCTCTTACTATGCCTTTGCAGGTGAAGTTGTGACTAATTCTGTGGGTGAACCTGAGCTTCTTTGTAATAATCGTGGGGTTGATTTTGTTGAAGCTGTGGCTGATGTTGAGCTTCAATGCATTAACTTTTATAATCCTGATGAATCTGTTGAAGGAAAGCTTGTTCCAAAGAAGAAGCACGGCGTGCTCGCTGTTCAGGCAACTTCATTAAAATGTGGTGGGATAGTAGTGGCATGCACATTTGATCATCGCATAGCAGATGCGTATTCAGCAAACATGTTTCTAGTATCATGGGCCGAGATGGCCCACTCAACAAAGCCCATCAAGCCCAAAACCATAACAACCACAAACAAACCATGTTTCCGTCGCTCCCTCCTTAGCCCCCGCCATCCCGGTTCTATCCACCCTTCTCTCGATGACATGTACATTCCCATTTCCAAACTTCCCCCTGTTTCGGCCACCAATACCAAGCCGCTACTTAGTCGAATATACTACGTCACTGCAGAGGAGCTCCAATGCTTGCAATCACTCGCTGCCACGACCAACGATGGCAACACTAAGCCTACAAAACTTGAATCTTTCTCTGCCTACTTGTGGAAGTTGGTTGCTCATGCTGCTATGAGGGACTGTAGTAAAATGGTCATTGCTAAAATGGGTATAGTGGTTGATGGAAGGAAGAGACTTGGCAAGAATTGTATTGACGAGGAAGGGAGAGAAGCAATGGTGGAACAATATTTTGGGAATGTTCTTTCTATACCCTTTGCCGGGAAACCGGTGGAAGAGTTAGTGGATAAGCCATTAGGGTGGGTGGTTGATGAGGTCCGTGAGTTTGTATCGGTAGCAACAACGGAGGAGCACTTTTTGGGACTCATTGATTGGGTGGAAGAGAATCGACCTATTCCAGGATTGGCAAAGATTTATTGCGGTTCCTCCAGTGAGGGACCAACTTTTGTGGTGTCTTCCGGGCAAAGATTTCCGGAAGACAAGGTTAATTTTGGGTGGGGGAAAGTTGTGTTTGCATCTTACCATTTTCCTTGGGGTGGTGAAGCTGGTTATGTGATGCCAATGCCAAGCCCTTTAAGGAATGGTGATTGGATTGTTTACATGCACCTTTTGAAAGAGCAGTTGGAGATCATAGAGTCCGAGGCAGATCATGTCTTTATACCTATAACTTGGGATTATCTCAACCAATGA 1422 0.4395 MDDNFIVSVTNEEVVAAVLPIQEHWLPLSNLDLLLPKVDVGVFFCYKNPMLLSTSTTLLTFESMVVSLKKALAKVLVSYYAFAGEVVTNSVGEPELLCNNRGVDFVEAVADVELQCINFYNPDESVEGKLVPKKKHGVLAVQATSLKCGGIVVACTFDHRIADAYSANMFLVSWAEMAHSTKPIKPKTITTTNKPCFRRSLLSPRHPGSIHPSLDDMYIPISKLPPVSATNTKPLLSRIYYVTAEELQCLQSLAATTNDGNTKPTKLESFSAYLWKLVAHAAMRDCSKMVIAKMGIVVDGRKRLGKNCIDEEGREAMVEQYFGNVLSIPFAGKPVEELVDKPLGWVVDEVREFVSVATTEEHFLGLIDWVEENRPIPGLAKIYCGSSSEGPTFVVSSGQRFPEDKVNFGWGKVVFASYHFPWGGEAGYVMPMPSPLRNGDWIVYMHLLKEQLEIIESEADHVFIPITWDYLNQ 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01515 473 Gene3D - 221 458 IPR023213 -
Trre5g01515 473 Pfam Transferase family 7 461 - -
Trre5g01515 473 Gene3D - 6 216 IPR023213 -
Trre5g01515 473 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 19 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01515 Trre-Chr5 10969331 10973165 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g01515 16 456 Monolignol Biosynthesis Gene Families AT5G48930 26.638 5.49e-32 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01515 - - tpra:123917257 887.486