Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01434 ATGGTAACCATTACAGCTTCTCACACTGTGATTCCAGAAAGACCTACTCCACAAGGTCGACTATGGCTCTCTGATATGGATCAAGTGGTTCGTCTCAGCCACACACCAACTCTTTACATTTACAAACCAAAACAGAACCAAGAACATAGAAGAACCATAGTAGAAACCTTAAAGAACTCTCTAAGCAAAGTTCTTGTTCACTACTATCCTATGGCTGGTAGAGTGTATTACACGGAAGGTGCTAGATTAGAATTGAATCTCAATGCAAAAGGTGCTATTTTGCTTGAAGCTGAAACTACAAACACAATTCATGATTATGGTGACTTTTCACCTTCTGACTCCACCAAAGAGCTTATTCCAATAATTGATTATAATCAACCAATTGAAGAAATTCCAAGTTTTATTGTCCAACTCACAAAGTTCAAAAACAATGAAGGCTTAGCAATTGGTGTTGCTTTTCTTCATCCTTTAGCAGATGGATTAGGAGCCATTAAATTCATCAACTCATGGGCCAAAATAGCAAGAGGTGAAACACTTGAGGCTAATGAGTTACCATTTTTGGATAGAACACTTCTCAAATTTTCACACCCCCCTTCGGAGCCACGTCTCGAACACTTCGAGTTGAAGCCACTACCACTCATTCTAGGAAGAAATGATACAAGTGAAGAAAAAAAGAAGAAAAATTCAGCAACATTGTTGAAACTTTCAGCAGAACAAGTTGATAAGTTGAAGAAAAAAGCCAATGAAGATGATGTTCTATCTATGAAGAAAAAAGGTTCAAGGCCTTATAGTAGATATGAAGCAATTGGTGCACATATATGGAGAAGTGCTTCCAAGGCACGTGAGCTTGAAGAGAATCAAGAAAGTGTTGTTAGATTCAATGCTGATATTAGAAATAGATTGATTCCACCACTTCCTAAAAACTATTTTGGGAACGCTTTGTCTCAAACTGCTGCAAAAGGGTATATTGGAGAAATCACATCAAAGCCTTTGGGTTATGTAGCACAAAAGATAAGGGATGCAACTGAGTTAGTAAGTGATGAATTCATAAGGTCACAAATCGATGTCATTAGAAGTTTTGAACATTTGGATGATGCAAGGAAATTGTTTTTAGGTAGTTTAGGTGAAAAATTTCCATATTTTGGTAATCCAAATTTTCATTTAACAAGTTGGATGAGTATGCCTATTTATGAAGCTGATTTTGGATTTGGGAAGCCTATTTACTTTGGATTATCATATGTCTCACCACATGATAGAGCATTGATTCTTCTTAGTCCTGAAGGAGATGGATCTGTTCATGTGTGTTTGCATTTTCAAATTGCACATTTGGAGCTTTTCAACAAATTTTTCTATCAGGATATATGA 1365 0.3641 MVTITASHTVIPERPTPQGRLWLSDMDQVVRLSHTPTLYIYKPKQNQEHRRTIVETLKNSLSKVLVHYYPMAGRVYYTEGARLELNLNAKGAILLEAETTNTIHDYGDFSPSDSTKELIPIIDYNQPIEEIPSFIVQLTKFKNNEGLAIGVAFLHPLADGLGAIKFINSWAKIARGETLEANELPFLDRTLLKFSHPPSEPRLEHFELKPLPLILGRNDTSEEKKKKNSATLLKLSAEQVDKLKKKANEDDVLSMKKKGSRPYSRYEAIGAHIWRSASKARELEENQESVVRFNADIRNRLIPPLPKNYFGNALSQTAAKGYIGEITSKPLGYVAQKIRDATELVSDEFIRSQIDVIRSFEHLDDARKLFLGSLGEKFPYFGNPNFHLTSWMSMPIYEADFGFGKPIYFGLSYVSPHDRALILLSPEGDGSVHVCLHFQIAHLELFNKFFYQDI 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01434 454 Gene3D - 217 453 IPR023213 -
Trre5g01434 454 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 438 - -
Trre5g01434 454 Gene3D - 1 210 IPR023213 -
Trre5g01434 454 Pfam Transferase family 1 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01434 Trre-Chr5 10214158 10215522 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g01434 2 452 Monolignol Biosynthesis Gene Families AT5G48930 35.698 5.97e-95 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01434 K13065 - gmx:100778626 575.089