Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01433 ATGGTAACCATTACATCTTCTCACACTGTGATTCCAGAAGAACCAACTCCACAAGGTCGACTATGGCTCTCTGATATGGATCAAGTGGTTCGTCTCAGCCACACACCAACTCTTTACATTTACAAACCAAAACAGAACCAAGAACATAGAAGAACCATAGTAGAAACCTTAAAGAACTCTCTAAGCAAAGTTCTTGTTCACTACTATCCTATGGCTGGTAGAGTGTATTACACGGAAGGTGCTAGATTAGAATTGAATCTCAATGCAAAAGGTGCTATTTTGCTTGAAGCTGAAACTACAAACACAATTCATGATTATGGTGACTTTTCACCTTCTAACTCCACCAAAGAGCTTATTCCAATAATTGATTATAATCAACCAATTGAAGAAATTCCACTTTTTATTGTCCAACTCACAAAGTTCAAAAACAATGAAGGCTTAGCAATTGGTGTTGCTTTTCTCCATCCTTTAGCAGATGGATTAGGAGCCATTAAATTCATCAACTCATGGGCCAAAATAGCAAGAGGTGAAACACTTGAGGCTAATGAGTTGCCATTTTTGGATAGAACAGTTCTCAAATTTTCACACACCCCTTTGGAGCCACGTTTCGAACACTTCGAGTTGAAGCCACTACCACTCATTCTAGGAAGAAAAGATACAAGTGAAGAAAGAAAGAAGAAAAATTCAGCAACATTGTTGAAACTTTCAGCAGAACAAGTTGATAAGTTGAAGAAAAAAGCCAATGAAGATGATGTTCTATCTATGAAGAAAAAAGGTTCAAGGCCTTATAGTAGATATGAAGCAATTGGTGCACATATATGGAGAAGTGCTTCCAAGGCACGTGAGCTTGAAGAGAATCAAGAAAGTGTTGTTAGATTCAATGCTGATATTAGAAATAGATTGATTCCACCACTTCCTAAAAACTATTTTGGGAATGCTTTGTCTCAAACTGCTGCAAAAGGGTATATTGGAGAAATCACATCAAAGCCTTTGGGTTATGTAGCACAAAAGATAAGGGATGCAACTGAGTTAGTAAGTGATGAATTCATAAGGTCACAAATTGATGTCATTAGAAGTTTTGAACATTTGGATGATGCAAGGAAATTGTTTTTAGGTGGTTTAGGTGAAAATTTTCCATATTTTGGTAATCCAAATTTTCATTTAACAAGTTGGATGAGTATGCCTATTTATGAAGCTGATTTTGGATTTGGGAAGCCTATTTACTTTGGATTATCATATGTCTCACCACATGATAGAGCATTGATTCTTCTTAGTCCTGAAGGAGATGGATCTGTTCATGTGTGTTTGCATTTTCAAATTGCACATTTGGAGCTTTTCAACAAATTTTTCTATCAGGATATATGA 1365 0.3619 MVTITSSHTVIPEEPTPQGRLWLSDMDQVVRLSHTPTLYIYKPKQNQEHRRTIVETLKNSLSKVLVHYYPMAGRVYYTEGARLELNLNAKGAILLEAETTNTIHDYGDFSPSNSTKELIPIIDYNQPIEEIPLFIVQLTKFKNNEGLAIGVAFLHPLADGLGAIKFINSWAKIARGETLEANELPFLDRTVLKFSHTPLEPRFEHFELKPLPLILGRKDTSEERKKKNSATLLKLSAEQVDKLKKKANEDDVLSMKKKGSRPYSRYEAIGAHIWRSASKARELEENQESVVRFNADIRNRLIPPLPKNYFGNALSQTAAKGYIGEITSKPLGYVAQKIRDATELVSDEFIRSQIDVIRSFEHLDDARKLFLGGLGENFPYFGNPNFHLTSWMSMPIYEADFGFGKPIYFGLSYVSPHDRALILLSPEGDGSVHVCLHFQIAHLELFNKFFYQDI 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01433 454 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 438 - -
Trre5g01433 454 Gene3D - 1 210 IPR023213 -
Trre5g01433 454 Gene3D - 217 453 IPR023213 -
Trre5g01433 454 Pfam Transferase family 1 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01433 Trre-Chr5 10172390 10173754 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g01433 2 452 Monolignol Biosynthesis Gene Families AT5G48930 35.477 1.54e-95 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01433 K13065 - gmx:100778626 569.696