Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01432 ATGGTAACCATTACAGCTTCTCACACAGTGATTCCAGAAGAATCAACACCGCAAGGTCGTTTATGGCTTTCCGATATAGACCAAGTGGTTCGTCTCCGCCACAGCCCAACTCTTTATGTTTACAAACCAAAACAGAACACTGAAAAAGCCATAGAAACTTTGAAGAACTCTCTAAGTAAAATTCTTGTTCACTACTACCCTATAGCTGGTAGAGTGTGTTACACGGAAGGTGCTAGATTAGAAGTGGATCTCAATGCAAAAGGAGCTATTTTGCTTGAAGCTGAAACCACAAACACAATTCATGATTATGGTGACTTTTCACCTTCTGACTCCACCAAAGAGCTTCTTCCAATAATCGATTACAATCAACCCATTGAAGAAATTCCAATATTTATTGTTCAACTCACAAGGTTCCAAAACAATGAAGGTTTAGCAATTGGTATTGCTTTTAACCACCTTTTATGTGATGGATTAGGAGCCATTAAATTCATAACCTCATGGGCCAAAGTAGCAAGAGGTGAAACACTTGAGGCTAATGAGTTACCATTTTTGGATAGAACACTTCTCAAATTTTCACACACCCCTTCGGAGCCACATTTCGAACACTTCGAGTTGAAGCCACTACCACTTATTCTAGGAAGAAATGATACAAGTGAAGAAAGAAAGAAGAAAACTTCAGCAACAATGTTGAAACTTTCATCAGAACAAGTTGATAAGTTGAAGAAAAAAGCCAATGAAGATGATGTTCTAGTTATGAAGAAAAAAGGTTCAAGGCCTTATAGTAGATATGAAGCAATTGGTGCACATATATGGAGAAGTGCTTCTAAGGCACGTGAGCTTGATGAGAATCAAGAAAGTGTTGTTAGATTCAATGCTGATATTAGAACTAGATTGGTTCCACCACTTCCTATGAACTATTTTGGGAATGCTTTGACTCAAACAGCTACAAAAGGGTATATTGGAGAAATCACATCAAAGCCTTTGGGTTATGTTGCACAAAAAATAAGGGAAGCAACTGAGTTAGTAAGTGATGAGTTCATAAGGTCACAAATTGATGTTATTAGAAGTTTTGAAAATTTGGATGATGCAAGAAAATTGTTTTTAAATTCTGAAGGTGAAATTGCTCCATATTTTGGTAATCCAAATTTTCAATTAACTAGTTGGATGAGTATGCCTATTTATGAAGCTGATTTTGGTTGGGGAAAGCCATTTTATGTTGGATTAGCTTATGTGTCACCACATGATAGAGCATTGATTCTTCTTAGTCCTGATGGAGATGGATCTGTTCTTGTGTGTTTGCATTTTCAGATTGCACATTTGGAGCTTTTCAACAAGTTCTTCTATGAGGATATATGA 1356 0.3673 MVTITASHTVIPEESTPQGRLWLSDIDQVVRLRHSPTLYVYKPKQNTEKAIETLKNSLSKILVHYYPIAGRVCYTEGARLEVDLNAKGAILLEAETTNTIHDYGDFSPSDSTKELLPIIDYNQPIEEIPIFIVQLTRFQNNEGLAIGIAFNHLLCDGLGAIKFITSWAKVARGETLEANELPFLDRTLLKFSHTPSEPHFEHFELKPLPLILGRNDTSEERKKKTSATMLKLSSEQVDKLKKKANEDDVLVMKKKGSRPYSRYEAIGAHIWRSASKARELDENQESVVRFNADIRTRLVPPLPMNYFGNALTQTATKGYIGEITSKPLGYVAQKIREATELVSDEFIRSQIDVIRSFENLDDARKLFLNSEGEIAPYFGNPNFQLTSWMSMPIYEADFGWGKPFYVGLAYVSPHDRALILLSPDGDGSVLVCLHFQIAHLELFNKFFYEDI 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01432 451 Pfam Transferase family 1 448 - -
Trre5g01432 451 Gene3D - 214 450 IPR023213 -
Trre5g01432 451 Gene3D - 1 207 IPR023213 -
Trre5g01432 451 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01432 Trre-Chr5 10164996 10166351 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g01432 2 449 Monolignol Biosynthesis Gene Families AT5G48930 34.521 1.66e-94 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01432 K13065 - gmx:100778626 579.326