Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01431 ATGGCAACAATCAAAGCTTATTACACTGTGAAACCAAATGAATTAACTCCAAAGGGTTGTTTATGGCTCTCAGATTTAGATCAAGTTGTTCGTCTCAGTCACACACCACTTATTTACATTTACAAACTAAAACAGAACACAGAAAACAGAACCATAGTTGAAACCTTAAAAAACTCTCTCAGCAAAATTCTTGTTCACTACTATCCTATAGCTGGTCGTTATTGTTACAAAGAAGGTGGTCGCTTAGAATTGAATCTCAATGCAAAAGGAGCTGTTTTGATTGAAGCTGAAACCACTAAAACTATTCATGATTATGGTGACTTTTCACCTTCTGATTCTACCAAAGAGCTTATTCCGAAAATCGATTATGATCGACCAATTGAAGAAATTCCATTGCTTGTTGCTCAAGTAACAAGATTTCAAAACAAAGATGAAAGTTTTGGATTTGCAATTGGAATTGCTTATTCACATCCTTTATCTGATGGGGTTGGTTGTTTTAATTTGTTGAACTCATGGGCCAAAATTTCAAGAGGTGGAACACTTGAGAATAATGAATTACCATTTTTAGATAGAACAGTTCTCAAATTCTCACACACCCCAATTGAGCCGCGCTTCGAACACATAGAGTTGAAGCCGTTGCCACTCATTCTAGGAAGATCAGACAATGATATTGAAAGAAAGAAGAAAACAACAGCTGAATTATTGAAACTCACAAAAGAACAAGTTGAAAAGTTGCAGAAAAAGGCTAATGAATTTTATATTCCAAAAGAGTCTAAACCTTTTAGCAGATTTGAAGCTATTAGTGCACATATATGGAAATGTGCATCGAAAGCTCGCGAGCTCGAAGAGAATCAAGAAACTGTTGTTAGATTCAATGTTGAAATCCGAAATAGAATAATTCCGAATCTTCCTAAAATTTATTATGGAAATGCTTTGATTCAAACTTTGACAAGAGGGTATATCGGAGAAATCACATCAAAGCCTTTGAGTTACATTGGAATGAAAATAAGAGAAGCACATGAGTTGATAACAAATGAGTATACAAGGTCACAAATTGATGTTATTAGAAGTTTTGAGAATTTGGATGATGCTAGAAAATTGTTTATAGGTGGAGAAGGTAAGAATGCAACATATTTTGGGAATCCTAATCTTCATATAACAAGTTGGATGGCTTTGCCTGCATATAAATCAGATTTTGGGTGGGGAAAACCATTTTACTTTGGTTTAGGATATGTATCACCACATGATAGGGGAATAATTTATTTGAATCCTAATGGAGATGGTTCTGTTATTGTGTGTATGCACTTTCAAGTTGCATTGATGGAGACTTTCAAGAAGTTCTTTTATGGAGATATAAATGAATTGTTCACATCAGCAAGATTGTGA 1386 0.3442 MATIKAYYTVKPNELTPKGCLWLSDLDQVVRLSHTPLIYIYKLKQNTENRTIVETLKNSLSKILVHYYPIAGRYCYKEGGRLELNLNAKGAVLIEAETTKTIHDYGDFSPSDSTKELIPKIDYDRPIEEIPLLVAQVTRFQNKDESFGFAIGIAYSHPLSDGVGCFNLLNSWAKISRGGTLENNELPFLDRTVLKFSHTPIEPRFEHIELKPLPLILGRSDNDIERKKKTTAELLKLTKEQVEKLQKKANEFYIPKESKPFSRFEAISAHIWKCASKARELEENQETVVRFNVEIRNRIIPNLPKIYYGNALIQTLTRGYIGEITSKPLSYIGMKIREAHELITNEYTRSQIDVIRSFENLDDARKLFIGGEGKNATYFGNPNLHITSWMALPAYKSDFGWGKPFYFGLGYVSPHDRGIIYLNPNGDGSVIVCMHFQVALMETFKKFFYGDINELFTSARL 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01431 461 Gene3D - 3 212 IPR023213 -
Trre5g01431 461 Gene3D - 219 450 IPR023213 -
Trre5g01431 461 Pfam Transferase family 3 448 - -
Trre5g01431 461 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 447 - -
Trre5g01431 461 Coils Coil 228 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01431 Trre-Chr5 10134172 10135557 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g01431 4 449 Monolignol Biosynthesis Gene Families AT5G48930 33.184 6.93e-85 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01431 K13065 - gmx:100778626 538.88