Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01386 ATGGCTTCTTCAACAACTCCATCAGATTCTGATACAATCAATGCTCCTTATGGTTCTTGGAAATCACCCATCACTGCTGATGTTGTCTCCGGCGCTTCCAAGAGACTTGGTGGTACTGCTGTTGATGGCCGTGGTCGTCTCATTTGGTTGGAATCACGTCCAACTGAATCAGGACGGGCAGTTCTTGTTCTTGAGCCGGAAAATCCAGGGGGTGAGGCTGTGGATATTACTCCAAAGGAGTTTGGAGTGAGAACATTGGCTCAGGAATATGGTGGTGGTGCTTTCACTGTTTCAGGAGATGTTGTCTTTTTTGCAAATTACAAGGATCAAAGATTATACAAACAATCCATCACTTCTCTTGATGTGCCTCCTATACCTCTCACTCCGGATTATGGTGGACCGGTTGTAAGCTACGCAGATGGAGTATTGGATACACGCTTTAACCGTTTTATTGCTGTAAGGGAAGATCGTAGGGAGAGCAGTCAAAATCCACCTACAACTATTGTATCAATAGCACTTGGCAGCAAGGATGTTAAAGAACCAGAAGTACTAGTTGGTGGGAGTGACTTCTATGCTTTCCCACGTCTAGACCCTAAAAGTGAAAGAATAGCATGGATACAGTGGAGTCATCCCAACATGCCGTGGGATAAATCAGAACTTTGGGTTGGCTATATTTCTGAAAATGGAGAGATCTACAAGCGTGTTTGTGTAGCTGGGTATGATCCTTCAGTTGTGGAGTCTCCAACTGAGCCCAAGTGGTCTTCTGATGGGGAACTTTTTTTCATCACGGATAGGGAAAGTGGTTTTTGGAATCTTCATAAATGGATTGAGTCAGAAAATAAGGTTGTGCCTGTTTATTCTTTGGATGCCGAGTTTGCTAGGCCACTATGGATTTTTGGTAATAATTCTTATGAATTTGTAAAAAGTCCTAAACAGAGAAACTTGATTGCTTGCAGTTACAGGCAGAAGGGAAAGTCATATCTTGGAATTATTGATGATGCACAGGGCTCAAACCTAACCGTGCTTGATATCCCGTTCACAGATATCGAAAACATTACTTCTGGCACTGGTTGCCTATTTCTCGAAGGGGCGTCTGCAGTTCTTCCATCATCAGTGGCCAAGGTGACTTTAGATGAGAATAAATCAAAAGTAGTTGACTTCAATATTATTTGGTCCTCCTCGCCTGATAGTTTAAAATATAGTTCGTACATCAGTAAGCCAGAGCTGATTGAATTCCCAACTGAAGTTCCTGGTCAAAATGCTTATGCATATTTTTATCCACCTTCTAATCCTAAATACCAAGCAATTGAAGGAGAAAAGCCTCCGCTATTATTGAAGAGCCATGGAGGGCCAACGGCTGAAACACGCGGAGTTTTAAATTTGAGCATTCAGTACTGGACTAGTCGGGGTTGGGCATTCGCTGATGTTAATTACGGGGGAAGCACCGGTTATGGCAGGGAGTACAGGGATCGGCTTTTAGGACGCTGGGGAATAGTTGATGTCAATGACTGTTGTAGCTGTGCTACATATTTGGCGGACAGCGGAAAAGCTGACAGCGAGCGACTGTGTATAACCGGGGGATCTGCTGGTGGATATACCACCTTAGCTGCACTTGCTTTTAAAGATACTTTTAAGGCTGGAGCTTCTTTGTATGGTGTAGCCGACTTGAAGTTATTGATAGAAGAAACTCATAAATTTGAATCTCACTACATTGATAATCTAGTTGGAGGTGAGAAGGAGTGGTTCGAAAGATCCCCAATCAATCACGTTGATAAATTTTCTTGTCCCATTATTTTATTTCAAGGATTGGAGGACAAGGTTGTGCCACCAAGTCAAGCTCGCAAAATTTACCAAGCTTTGAAGGAAAAAGGTGTGCCAGTTGCTCTTGTTGAGTATGAAGGAGAACAACATGGTTTCCGAAAGGCTGAGAACATTAAGTATACACTTGAACAACAAATGGTTTTCTTTGCGCGATTGATTGGGCGCTTCAATGTTGCTGATGATATCACTCCTATCAAAATTGACAACTTCGATCAAGAATGA 2043 0.4268 MASSTTPSDSDTINAPYGSWKSPITADVVSGASKRLGGTAVDGRGRLIWLESRPTESGRAVLVLEPENPGGEAVDITPKEFGVRTLAQEYGGGAFTVSGDVVFFANYKDQRLYKQSITSLDVPPIPLTPDYGGPVVSYADGVLDTRFNRFIAVREDRRESSQNPPTTIVSIALGSKDVKEPEVLVGGSDFYAFPRLDPKSERIAWIQWSHPNMPWDKSELWVGYISENGEIYKRVCVAGYDPSVVESPTEPKWSSDGELFFITDRESGFWNLHKWIESENKVVPVYSLDAEFARPLWIFGNNSYEFVKSPKQRNLIACSYRQKGKSYLGIIDDAQGSNLTVLDIPFTDIENITSGTGCLFLEGASAVLPSSVAKVTLDENKSKVVDFNIIWSSSPDSLKYSSYISKPELIEFPTEVPGQNAYAYFYPPSNPKYQAIEGEKPPLLLKSHGGPTAETRGVLNLSIQYWTSRGWAFADVNYGGSTGYGREYRDRLLGRWGIVDVNDCCSCATYLADSGKADSERLCITGGSAGGYTTLAALAFKDTFKAGASLYGVADLKLLIEETHKFESHYIDNLVGGEKEWFERSPINHVDKFSCPIILFQGLEDKVVPPSQARKIYQALKEKGVPVALVEYEGEQHGFRKAENIKYTLEQQMVFFARLIGRFNVADDITPIKIDNFDQE 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01386 680 Pfam Prolyl oligopeptidase family 462 661 IPR001375 GO:0006508|GO:0008236
Trre5g01386 680 PANTHER PEPTIDASE S9 PROLYL OLIGOPEPTIDASE 12 673 - -
Trre5g01386 680 SUPERFAMILY alpha/beta-Hydrolases 392 678 IPR029058 -
Trre5g01386 680 Gene3D alpha/beta hydrolase 399 666 IPR029058 -
Trre5g01386 680 SUPERFAMILY Tricorn protease domain 2 60 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01386 Trre-Chr5 9762352 9768135 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g01386 14 678 Carbohydrate Esterase AT5G36210 74.775 0.0 1047
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01386 - - tpra:123917153 1344.72