Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01382 ATGGCTCCTAAACAACCGAGCATGGCTCTATTTGTTATATTGAACAAAGGTCATATTGTCACTAAAGATGGAATTGGCTCCATGTCCTCGCCTGGTGAAAACAAACAAGAGGGTGCACTTTGTGACGAACCCGTTAGAGAGGTTGTTGATTTTTCACCTTATGAAAAGTGTACAAATATAGCTAAACTGCTGAAGGTTGAAACAGACAGAATAGTTACTTTCAAAGTTTCCAACATATTTTGA 243 0.3827 MAPKQPSMALFVILNKGHIVTKDGIGSMSSPGENKQEGALCDEPVREVVDFSPYEKCTNIAKLLKVETDRIVTFKVSNIF 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01382 80 Pfam Ribosomal protein L36e 10 70 IPR000509 GO:0003735|GO:0005840|GO:0006412
Trre5g01382 80 Gene3D 60S ribosomal protein L36 1 75 IPR038097 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g01382 9 70 Cytoplasmic Ribosomal Protein Gene Family AT2G37600 39.062 2.08e-07 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01382 K02920 - cave:132187385 57.7658