Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01373 ATGATTGTGAGGGTTATGGAAAAGTTGAGAAAATTGAGATTTTTGAACTCTCGAATTCCTTTTCTCTCTCAGTTAATTTTCTTTGTTCGGTTTTCTAAAGTTTACAAAAAGCAAAGTACATGGTTGAGTTGGAAATTCAGATTCCATCGACATTTGATCCATTCGCTGAAGCTAAAGAATCGGATGCAACTGGAGCGAAAGGATAAAGAGCTTGGCAAAATTATCCAACTTCAAGGTGATCAAAGGAAGAACGTTTCTCAGTTTTTGGTTAAAGCTGGTCTTGTGATGAAGGATCAGATTAAGATTCATGGTTTTTGA 318 0.3585 MIVRVMEKLRKLRFLNSRIPFLSQLIFFVRFSKVYKKQSTWLSWKFRFHRHLIHSLKLKNRMQLERKDKELGKIIQLQGDQRKNVSQFLVKAGLVMKDQIKIHGF 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01373 105 SUPERFAMILY eIF1-like 67 105 IPR036877 GO:0003743|GO:0006413
Trre5g01373 105 Gene3D - 50 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01373 Trre-Chr5 9629617 9631522 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g01373 67 105 Eukaryotic Initiation Factors Gene Family AT4G27130 79.487 1.16e-16 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01373 K03113 - csv:101214921 74.3294