Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01329 ATGGCTGTGACTGTTGCATCTAATGTGGGTAAACATTTGGCGGCACCTATGCTCCGAGAATTAGGATACCTTCTTTGTGTTACATACGTAATCGATGATCTTGAGGATGATAAGAAGGCGCTGACAGAAGAAAGAGACTACGTGAAGACTCGTATTGAACAAGCTAAGGCGATAACTGAAGTAATTGAAGAACCAGTGGAGAGGTGGTTGAGTGATGTAGATAAACTCCTGGGAGAAGTGGAGGTTCTTCTACAAAGGAAAGAGACAGGCTTTAATTGCTTTCAAGGATGGTTACCAATGTGGGGCCGGTATCTTCTCTGCAAGCAAATGGTCAAGATGATAGAGGAAATGGGAAAATTCACTGGCAAAAGCAAAGATATTCAACCATTTTCTCATCTTGCTCCACTACCAGGATTGTATGGAGAGGGTGGATGTGGAAAAACAACTCTTGTAACCGAAGTTGGCAAACAGGCTGAGGATCGGAAAATGTTTGATAGGGTTATATCAATCACTGTGTCTCAAACTCCAAATATTAGAGCCATTCAAGGAGAAATCGCGGATATGTTAAAATTGAAACTGGAGGAAGAAAGTGAAAAGGGAAGAGCACAACGTTTATGGATGAGTTTGAAAGAAAATAAGCGAATTCTTATAATAGTAGACGATCTATGGAGTCAGTTTCATTTGATGGATATTGGGATTCATGTCAATGGACGCACATGGAAAATCCTTGTAGTCACTCGTAACGAGCATATCTGTACTTTAATGGACTGTCAAGAGATGATTCATTTGGGGCACTTGTCTGAAAATGAATCTTGGACTTTGTTCCGAAAGCTTGCAAGAATTGATGACGATTTCTGTGTATTATTAGATGGTGTGCCACGGAAAATTTGCAATGAATGCAAGGGAATTCTCATAGCAATCAAAACTATGGCATCTTCCTTAAGAGGAAAGAAAAATACTGAGTGGCAGTCAACATTAGCTAAGTTGATCGATTCAAAAGCATTTGATGATCATGATGGAGGAGAGAGGAATGCTTTAAATTGTATTAAATTAAGCTATGATTGTTTACAAAATAGAGAAGCAGAGCTGCTCTTTCTGATGTGTTGTATGTTTCCACAAGACTATCACATCCCAATAGAAGATTTGACGAGGTATGCAATTGGACTAGTTCAAACATACTCATTTCAATTAACGAGGAGCTTGGTGGAAGCATGCATAAACAGACTTTTGGAGTCAAGTATGCTGATGCGTGGTTCTGTGAAGATGCATAACATGGTTCATGAAGCAGCCTTATGGATTGCAAATAGATCAGATAATTGCAAAATCATGGTAAATGTTGACAAACCACTTAGCACTGTGGCAGAAGATAACAGAATAAGAGATTGTTTTGCAGTATCTTCATGGTGGTATAATGAAAATCCCTCTTTTTGTGAATTGCATGCTCCAAATCTTAAAATGCTATTGGTAAATATAAGTGCTCATAGTTCATTGAATTCCTTGGATTTATCACCTTTAACATTTGAAGGTATACAAGGGCTTCAGGTATTCTCTCTAATCATCAATTACAAAATAATACCAATATCATTTCCTCCATCAATCCAACTATTGAGAAATGTTCGAACTCTGCGCTTAAATGGATTGAAGCTTGGTGACATTTCTTTCATAGCAAGCTTAACAACACTAGAGGTTCTTGACTTGCGACGTTGTTACTTCAACGAACTTCCTATTGTAAGACGCTTGATGCTGATAGATTTGTCAGAATGTCATATTTCTGAAAACAACTATAATGGAGCGTTACGCAAATGTTCACAACTAGAAGAGTTGTATGCATTACCATGCTACACAGAAGCAAACGTTCCGACAATCGTTATTGACACCGAGATTCTTCCAAAGTTGAAGAGATTTGAACTAAGTCATTCATTCTTTCCAAAAGAGAAAATTCTTATTGAGCTTAAGAATTCAAATATCTCCAAGTTCAAGGGATCCAAAAAGAATATTCTGCAAATGGCTGAAACTCTTTCTTTTACAGGCCTCCACGGGGAATGTAAAAATATCATCCCAGATATGGTAGGAAGCATGAATAATTTGTCTACTCTCCATCTTGAAAATTGTAAAGAGATAAAATGCATCTCTGATGCAACCTGTGATTTGAAGGAAGATGATTTGATTCCCAGGTTGGTTGAGTTACGCCTTGAGTCTATGCATAACCTGACAGAACTGTTTCATGGTTCACCTCTGCAAGTGTTACACGTCATATTTGAGAAACTAGAACTACTTCACATAAATAGTTGCCAGAAGTTACACGTCATATTTCCACGGGAATGTAAGTTACAAAATCTTAAGTTCCTCAGATTATCATATTGCAAGACCGATGAAGTACTCTTCTCAGAATCTGTTGCTCAAAGTTTGCATCAACTAGAACAGCTAACGATATCCGGTTGCAGTGAATTGAAGCATATAATTTCTGCAAGTGGAAGCGAACATGGTGATTGTAGTGCAAGTGAGAAAATAAAGCCAGCCCCAAGGAACTCTCATGTTTTGATGACAAATCTAAGGGATATTAAAATTTCATTTTGTGAAAGTTTGGAGTGGATTTTCCCAATTTCTTATGTCAAAGGACTTGCACGATTGCAAAAGATGGATATATCCTTTTCTCATAAGCTGGAATATGTGTTTGGTGAATATGATGACGAAAAACTTTCATCAATCCAATACCAGAACCATGTCATGCTTCCTCATTTGGAACTTCTCAAACTCAGTGATCTTGACAATCTCATTTGGTTGTGTCCAGAGAATTGTCAACCAAAGTGGCCATCTCAGCCTCCGGGGATTCTAACCATAGAGAAATGTCCAAAAGTGATAATACCAAGCTTCAATTTGAGGGTTGACCATGATCAAACACAACATCGTCTGAATGAAAAGTCACTTTTAAAGCTGGAAAATTTGGGATTGGAATTGCATGAATTGCACTCCATCTCATTGCTAGTTCCTGCTCCAAGACAGATTTGGAATTTTGAAATTCTTCAAAGTATAAAAGTAGGCAATTGTGAAAATATGAAATATTTGCTCACCATGGAAACATGTACAAGCCTACCAGAGTTGACGTCCCTTAAGATTGACAACTGCCAAGAGTTGGAACAAATTGTAGCAGCAGATGAAGAACTTGTTCAGTTAGCTAATGCTGAATTGTATTTTCCAAAGCTAAAACATATAGAAGTCCAGAACTGCAACAAGTTGAAAAGCCTTTTCCCTTTTGCCATGGTTAAAATGCTTCCACAATTAAGCAAACTTTACTTATCAAAAGCTAGTCAACTTGAAGAAGTTTTTAGACGCAGTGGTGGAGACGACAGTTTGAATACAATGGAAATTGTTCTTCCAAACTTGACAAAATTAACATTGCGGCATCTACGAAATTTTGTAGATATCTGCCGTGGCAGTAAGTTACGTGCCACTTTACTTGGAGAACTCAACATATCCGACTGCTGCAATATTGCTCCAACTTCAAGCTTAAGAAATATTGTGGTTGCAAGGGGCAGCATAAGTTGA 3546 0.3787 MAVTVASNVGKHLAAPMLRELGYLLCVTYVIDDLEDDKKALTEERDYVKTRIEQAKAITEVIEEPVERWLSDVDKLLGEVEVLLQRKETGFNCFQGWLPMWGRYLLCKQMVKMIEEMGKFTGKSKDIQPFSHLAPLPGLYGEGGCGKTTLVTEVGKQAEDRKMFDRVISITVSQTPNIRAIQGEIADMLKLKLEEESEKGRAQRLWMSLKENKRILIIVDDLWSQFHLMDIGIHVNGRTWKILVVTRNEHICTLMDCQEMIHLGHLSENESWTLFRKLARIDDDFCVLLDGVPRKICNECKGILIAIKTMASSLRGKKNTEWQSTLAKLIDSKAFDDHDGGERNALNCIKLSYDCLQNREAELLFLMCCMFPQDYHIPIEDLTRYAIGLVQTYSFQLTRSLVEACINRLLESSMLMRGSVKMHNMVHEAALWIANRSDNCKIMVNVDKPLSTVAEDNRIRDCFAVSSWWYNENPSFCELHAPNLKMLLVNISAHSSLNSLDLSPLTFEGIQGLQVFSLIINYKIIPISFPPSIQLLRNVRTLRLNGLKLGDISFIASLTTLEVLDLRRCYFNELPIVRRLMLIDLSECHISENNYNGALRKCSQLEELYALPCYTEANVPTIVIDTEILPKLKRFELSHSFFPKEKILIELKNSNISKFKGSKKNILQMAETLSFTGLHGECKNIIPDMVGSMNNLSTLHLENCKEIKCISDATCDLKEDDLIPRLVELRLESMHNLTELFHGSPLQVLHVIFEKLELLHINSCQKLHVIFPRECKLQNLKFLRLSYCKTDEVLFSESVAQSLHQLEQLTISGCSELKHIISASGSEHGDCSASEKIKPAPRNSHVLMTNLRDIKISFCESLEWIFPISYVKGLARLQKMDISFSHKLEYVFGEYDDEKLSSIQYQNHVMLPHLELLKLSDLDNLIWLCPENCQPKWPSQPPGILTIEKCPKVIIPSFNLRVDHDQTQHRLNEKSLLKLENLGLELHELHSISLLVPAPRQIWNFEILQSIKVGNCENMKYLLTMETCTSLPELTSLKIDNCQELEQIVAADEELVQLANAELYFPKLKHIEVQNCNKLKSLFPFAMVKMLPQLSKLYLSKASQLEEVFRRSGGDDSLNTMEIVLPNLTKLTLRHLRNFVDICRGSKLRATLLGELNISDCCNIAPTSSLRNIVVARGSIS 1181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01329 1181 Coils Coil 1042 1062 - -
Trre5g01329 1181 Gene3D Ribonuclease Inhibitor 652 896 IPR032675 -
Trre5g01329 1181 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 137 360 IPR027417 -
Trre5g01329 1181 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 877 1124 - -
Trre5g01329 1181 SUPERFAMILY RNI-like 988 1164 - -
Trre5g01329 1181 Gene3D - 352 431 IPR036388 -
Trre5g01329 1181 Pfam NB-ARC domain 138 335 IPR002182 GO:0043531
Trre5g01329 1181 Gene3D - 265 351 IPR042197 -
Trre5g01329 1181 SUPERFAMILY L domain-like 421 932 - -
Trre5g01329 1181 PRINTS Disease resistance protein signature 801 817 - -
Trre5g01329 1181 PRINTS Disease resistance protein signature 300 314 - -
Trre5g01329 1181 PRINTS Disease resistance protein signature 136 151 - -
Trre5g01329 1181 PRINTS Disease resistance protein signature 209 223 - -
Trre5g01329 1181 Gene3D Ribonuclease Inhibitor 457 651 IPR032675 -
Trre5g01329 1181 Coils Coil 31 51 - -
Trre5g01329 1181 Gene3D Ribonuclease Inhibitor 897 1112 IPR032675 -
Trre5g01329 1181 Gene3D - 108 262 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01329 Trre-Chr5 9312530 9316493 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g01329 138 436 WRKY Transcription Factor Family AT5G45050 24.595 2.63e-09 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01329 - - mtr:25488990 1449.88