Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01325 ATGGCAGATGTGGTTGTGAATATTATTGTGACCGTGGCAACTGCTTTGGCAAGTCCTATCCATCGAAAAGTAAAATACCTTTTTTGTGCAAATAAAGTGGTCAATGATCTTGAGGATGCAAGGAAGGCGCTGACAGAAGAAAGAGACAACATGAAGACTCGTATCGAACAAGCTGAGAAGAAAACTGAAATAATTGAAAAGGCAGTAGAGAAGTGGTTGACTGATGTGGAAAATCTCCTGAGACAGGTGGATGATCTGGTACAAAGGACGAAAACAGACATTAATTGCTTTCAAGGATGGTTTCCAATGCGTGGACGGTATCTTTTCTGCAAGCAAATGGTGAAGAAGATAAAGGCAATGGGAAAATTCATAGGCACAAGCAAAGATATTCAACCATTTTCTCATCTTGCTCCACTGCGAGGTATTCCAATTGCATCTAAAGACTTCATTTATTTTGCATCAACACAAAAGGCTTATGATGAACTCTTTGATGCACTTAAGGATGACTCCATCCATATGATAGGATTGTATGGAGCGGGTGGATGTGGAAAAACAACTCTTGTTAGAGAAGTTGGCAAGAAGGCTGTCGAACAGAAAATGTTTGATATGGTTATATCAATCACTGTGTCTCAAAGACCAAATATTAGTGGCATTCTTGGAAAAATTGCAGATATGTTAAACTTCAGACTGGAGGAAGAAACTGTGGAGGGGAGAACAGAACGTTTGTGGAGGCGTTTGGAACAGGAAAAAGATAATCGAATTCTTATCATAGTAGACGATCTATGGAGTCAGTTTAATATGATGGATATTGGGATTTGCCATGTTGATAGACACACATGGAAAATCCTCGTAGTCACTCATAACGAGGGTATCTGTACTTTAATGGACTGTCAAAAGATGATTCATTTGAGGCACTTGTCTGAAGATGAATCTTGGACTTTGTTCCAAAAGCTTGCCAAAATTGATGACAACTTCTGCGAGTTATTAGATGGTGTGCCACAGAAAATTTGCGATGAATGTAAGGGAGTTCTCATAGCAATCAAAACTATGGCATCTTCTTTAAAAGGAAAGCATGATACTGAGTGGAAGTCAACATTAGCTAAGCTGGTTGATTCAAAAGCATTTGATGATCATGAAGGAGGAGAGAGGAATGCTTTAAATTGTATTAAATTAAGCTATGATTGTTTACAAAATACAGAAGCAGAGCTGCTCTTTCTGATGTGTTGTATGTTTCCACAAGACTATCACATCCCAATAGAAGATTTGACGAGATATGCACTTGGAGTACTAAGTACATACTCATTTCAATTACTGAGGAGCTTGGTCGAAGCATGCATAAACAGACTTTTGGAGTCAAGTATGCTGATGCGTGGTTCCGTGAAGATGCATAACTTGGTTCGCGAAGCAGCCTTATGGATTGCAAACAGATCAGATAATTGGAAAATCATTGTAAATGTTGACAAACCACTTCGCATTGTGGCAGAAAATAACAATATAAGAGATTGTTTTGCAGTATCTTCATGGTGGTATAATGAAAAACCCTCCTTTTGTCAATTGTATGCTCCTAATCTTAAAATTCTATTGTTAAATATAAGTGCTCATAGTTCATTGAATTCCTTGGATTTATCACCTTTAACATTTGAAGGAATACAAGGGCTTCAGGTATTCTGTCTAACCATCAATTACGGAAGAATACCAATATCATTTCCTCCATCAATCCAACTGTTGACAAATGTTCGAACTCTACGCTTAAATGGATTGGAGTTTGGTGACATTTCTTTCATAGCCAGCTTAACAACACTAGAGGTTCTTGACTTGCGACGTTGTTCGTTCAAAGAACTTCCTATCGAAATAGGAAAGCTCATAAGCCTGAAGCTGCTAGATTTGTCAGAGTGTCGTATTTATGGAGACAACTATAAGGGGGAAATAGGAAAATGTTCACAGTTAGAGGAGTTCTATGCTTCAAAATGCTATCCATATGGGTATGTTCATGGAATCATTCTGGATATTGGTATTCTTCTAAATCTACAAAGGTTTGTATTTGGTGAACCAATCATTCCAGAAAGCACTAGAGCTCTTCAAGTATATGATTTTAATATCTCAAAGTTGAGGGAATCCAACAAGAATATTCTGCAAATAGCTGAAACTATTTCTTTGAGTGGTCTCCATGGAGAATGTAAAAGTATCGTCCCAGATATGGTTGGATTTGTGGGAGGCATGAATAATTTATCTACTCTCCACCTTCAATATTGTGAAGAGATAGAATGTATCTTCGATACAACCTGTGATTTCAAGGAAGATGATTTGATTCCCAGATTGGTTGAGTTACGGCTTAAGTCTATGGATAACTTGACAGAACTGTGTCATGGTCCACCTCTGCAAGTACTACACTACTTTGAGGAACTAGAAGTACTTGACATAGATATTTGCTGGAAATTACACATTGTATTTCCATCGGAATGTAAATTGCAAAATCTTAAGATCCTCAGCTTATCACATTGCAAGACTGATGAAGTACTCTTTTCAGAATCTGTTGCTCAAAGTCTGCAGCAACTAGAACAAGTAACAATAAAAGGCTGCAAAGAACTGAAGCATATAATTGCTTCAAGTGAAAGCGATCATGGTGGCTGTAATACAAGTGAAGAAATAATTCCAGCTCCTATGATCATTTTTATGACCAATCTAAGGGAAGTTACGATTTCACGTTGTCACAGATTAGAGTCAATATTTCCAATTTTTTATGTCGAAGGACTTCCACGATTGCAAAAGATGGATATATCAACTTCTTTTATGCTGAAATATGTGTTTGGTGAATATGATCATGAACGCCTTTCATCGTACCAATACCAAAACCATGTCATGCTTCCTCATTTGGAAGTTCTCGAACTCAATAATGTTAGGAATCTCATTGGGATCTGTCCAGAGAATTGTGAAGCAAAGTGGCCACCTCAGTCTCCGAGGATAATAAACATACAGCGATGTCCAAAATTGGCCATACCATGGTTGAATTTGAAGGTTGGCTATGATAAGAGTCAACATCATCTGAATGAAATTTGGAGTTTCCAATGTCTTCAGAGTTTAACATTGGCTAATTGTGAAGAATTGAAATGTTTGTTCTCTACGGAAACACACAGAAGCCTGCCAGAGTTGATGTACCTTTCCGTTTCTAATTGTCATGAATTGGAACAAATTGTTGAAGCAAATGAAGAACTTCTGCAGCTTTCTAATGCTGAATTGTACTTTCCAAAGCTAAAACAAATAACAGTCTATAATTGCAACAAGTTGAAAAGCCTTTTCCCTCTTTCTATGGTTAAAATGCTTCCACAATTAAGCATTCTTGACTTATCAAGAGCTACTCAACTTCAAGAGGTTTTTAGACATGGTCAAGGAGATGGTGTTATGAACCAAAAGGAAATTGTTCTTCCAAACTTGACAGAAATAACATTCTCCGAACTACCAAATTTTGTTGATATCTGCCATGGTTGTAAATTACATGCGGTTAAACTCATAAAACTCCGCATATCTAACTGCCCCAAAACTGCTTCAAGCTTAAGAATAATTCAGGATCAAATTGAAGAAGCAGCGTATGTGGAAGAACAATCAGAACCCGACTTCACGTGGCGCAAAGGAAAATCAATAGAAATTGATATTTTTGGTGTTGATAAGGATGAAACTGAAGAAGGAAAAGCAAAAGACAAAGAAATTGAAAAAAGAAAAGCAAAAGAACCAAGGAAGGAAAAAACCTTAATATTTCACCTTAGACCAACTTGTCCATCTCAACTTTGTTGA 3789 0.3721 MADVVVNIIVTVATALASPIHRKVKYLFCANKVVNDLEDARKALTEERDNMKTRIEQAEKKTEIIEKAVEKWLTDVENLLRQVDDLVQRTKTDINCFQGWFPMRGRYLFCKQMVKKIKAMGKFIGTSKDIQPFSHLAPLRGIPIASKDFIYFASTQKAYDELFDALKDDSIHMIGLYGAGGCGKTTLVREVGKKAVEQKMFDMVISITVSQRPNISGILGKIADMLNFRLEEETVEGRTERLWRRLEQEKDNRILIIVDDLWSQFNMMDIGICHVDRHTWKILVVTHNEGICTLMDCQKMIHLRHLSEDESWTLFQKLAKIDDNFCELLDGVPQKICDECKGVLIAIKTMASSLKGKHDTEWKSTLAKLVDSKAFDDHEGGERNALNCIKLSYDCLQNTEAELLFLMCCMFPQDYHIPIEDLTRYALGVLSTYSFQLLRSLVEACINRLLESSMLMRGSVKMHNLVREAALWIANRSDNWKIIVNVDKPLRIVAENNNIRDCFAVSSWWYNEKPSFCQLYAPNLKILLLNISAHSSLNSLDLSPLTFEGIQGLQVFCLTINYGRIPISFPPSIQLLTNVRTLRLNGLEFGDISFIASLTTLEVLDLRRCSFKELPIEIGKLISLKLLDLSECRIYGDNYKGEIGKCSQLEEFYASKCYPYGYVHGIILDIGILLNLQRFVFGEPIIPESTRALQVYDFNISKLRESNKNILQIAETISLSGLHGECKSIVPDMVGFVGGMNNLSTLHLQYCEEIECIFDTTCDFKEDDLIPRLVELRLKSMDNLTELCHGPPLQVLHYFEELEVLDIDICWKLHIVFPSECKLQNLKILSLSHCKTDEVLFSESVAQSLQQLEQVTIKGCKELKHIIASSESDHGGCNTSEEIIPAPMIIFMTNLREVTISRCHRLESIFPIFYVEGLPRLQKMDISTSFMLKYVFGEYDHERLSSYQYQNHVMLPHLEVLELNNVRNLIGICPENCEAKWPPQSPRIINIQRCPKLAIPWLNLKVGYDKSQHHLNEIWSFQCLQSLTLANCEELKCLFSTETHRSLPELMYLSVSNCHELEQIVEANEELLQLSNAELYFPKLKQITVYNCNKLKSLFPLSMVKMLPQLSILDLSRATQLQEVFRHGQGDGVMNQKEIVLPNLTEITFSELPNFVDICHGCKLHAVKLIKLRISNCPKTASSLRIIQDQIEEAAYVEEQSEPDFTWRKGKSIEIDIFGVDKDETEEGKAKDKEIEKRKAKEPRKEKTLIFHLRPTCPSQLC 1262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01325 1262 Gene3D Ribonuclease Inhibitor 494 875 IPR032675 -
Trre5g01325 1262 Gene3D Ribonuclease Inhibitor 876 1127 IPR032675 -
Trre5g01325 1262 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 142 400 IPR027417 -
Trre5g01325 1262 Coils Coil 30 89 - -
Trre5g01325 1262 Gene3D - 392 471 IPR036388 -
Trre5g01325 1262 Pfam NB-ARC domain 157 375 IPR002182 GO:0043531
Trre5g01325 1262 SUPERFAMILY L domain-like 461 1122 - -
Trre5g01325 1262 Gene3D - 134 302 IPR027417 -
Trre5g01325 1262 PRINTS Disease resistance protein signature 248 262 - -
Trre5g01325 1262 PRINTS Disease resistance protein signature 173 188 - -
Trre5g01325 1262 PRINTS Disease resistance protein signature 340 354 - -
Trre5g01325 1262 PRINTS Disease resistance protein signature 619 635 - -
Trre5g01325 1262 SUPERFAMILY L domain-like 687 861 - -
Trre5g01325 1262 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 893 1097 - -
Trre5g01325 1262 Gene3D - 305 391 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01325 Trre-Chr5 9285269 9289629 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g01325 171 476 WRKY Transcription Factor Family AT5G45050 23.077 7.17e-08 55.5