Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01221 ATGTACGAACACCATAATGCAGATGCAGTGACAATAAACACTTACACAGCAATATCACCAGCAAATCTCATATTTGAAGATGTTTGTAACCTTGCATTGGACAAAGTTGCTTCCATCATCATTCTTCCATTTCATATAAGGTGGTCTAGTGATGGCGTAGTTGAATCTAATGACAAAAAGATTTTAAGACCATTGAACCAAAGAGTCCTTGAAATAGCTCCATGTTCTGTTGGAATCCTCGTAACTCGCGCTAATTCAATACCAAAAGCAACAACAACATCAGAATATTCCACTGCACGATTGGCAGTTATTTATTTAGGTGGAAACGACGACGATGAAGAGGTTTTATGTTTAGCAAAACGATCTATGAATAATCCTAGGATCAACCTTGTTGTTTACCACCTTGTTGGTAAAGATTGCAAAGGGGAGTTGGAGCAGTTAATGGTAAATGATGATGATGATGATGATGATGATGATCAAGTGTTGCAAGAAATTATACATGCTACAAATGTGAGGTATCAAAAGATATTCACAAAAAATGGATCACAAACAGCTTGTTTTCTACGTGAAGTTGTGAATCAACATGATTATTTTATAGTTGGAAGAAGACATGAAACTCATTCTCCTCAAACTGATGGATTAACAGATTGGATTGAATTTCCAGAACTTGGTGCTATTGGTGATTTTCTTGCTTCACCTGATCTTAATAGTCGTGCATCTATTTTGGTTGTGCAACAACAACTCTCACACAAGAATGAACACAAAAGTTGGATTTTGTAG 780 0.3615 MYEHHNADAVTINTYTAISPANLIFEDVCNLALDKVASIIILPFHIRWSSDGVVESNDKKILRPLNQRVLEIAPCSVGILVTRANSIPKATTTSEYSTARLAVIYLGGNDDDEEVLCLAKRSMNNPRINLVVYHLVGKDCKGELEQLMVNDDDDDDDDDQVLQEIIHATNVRYQKIFTKNGSQTACFLREVVNQHDYFIVGRRHETHSPQTDGLTDWIEFPELGAIGDFLASPDLNSRASILVVQQQLSHKNEHKSWIL 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01221 259 PANTHER CATION/H + ANTIPORTER 2 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01221 Trre-Chr5 8618792 8619571 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g01221 2 247 Antiporter Super Family AT5G22900 38.077 4.88e-48 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01221 K26731 - mtr:11420455 386.341