Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01210 ATGGCAGAAATGGCTGTATCTTTTGCTATTGACAAACTGCTTCCATTGTTAACAGAAGAAGTGAATCTGCTCAAAGGTGTTCACAAGGAATTTGCAGACATTAAAGATGAACTCGAAAGCATCCAAGCCTTTCTTAAGGATGCTGATAGAAGAGCTGCTGCAGCTAATGGAAACAACACTGATGAAGGAGTCAAAATTTGGGTGAAACAGCTTAGGGAAGCAGCTTTTAGAATAGAAGATATCATTGATAACTATATGATGCATGTGGAACAACAGCCTCGTAATCCCGGGTGTGCAGCTTTATTCAACAATTTTTCTTACTTGTTCAAAAATTTGAAACAACGCCATCAAATAGCATCTGGGATTCAGGACATTAAGTCATTGGTGTGTGGGATCAAGGAAAGAAGTAAAAGATATAGTTTCCAACGTTCTTTTGAACAAGGTTCAAGCAGTTCTAGTGAAAGCCAGAAATCAAAACTGCACCCTCTTCGAGAGGATGCTCTTTACATTGACGAAGCTGACGTTGTGGGCTTTGAAGAACCAAGAAAAACATTGATTGATTGGATGTTCGACGGAAGTGAGAACCCCATTGTCATCTCTGTGGTAGGAATGGGAGGACAAGGGAAAACCACTCTAGTCAAGAAAGTTTTTGACAACAAGGATATCATTGCACACTTTGATTGTCGTGTATGGATCACAATGTCACAAACATATGATGTTAAAGAGGTGTTGAGGGACATGTTGCTAAAACTTTACAAACAGAAAGGAGACAACCCACCTCAGAATATTAATCAAATGGATCAAAGGTCATTGACTGAAGAACTGAGAAACTACTTGAAGCCAAAGAGGTACGTTGTGGTGTTTGATGATGTTTGGAGTGTAAAGTTTTGGGATGATATTAAATTTGCTGTGATTGATAATAAAAGTGGAAGTAAGATACTAATAACAACAAGGAATGAGGAAGTTTTGGTGTCTTGTAAAATATCTTCTTTCACTCAAGTGCTTCATTTGAAACATTTAACTGAGGATCAGTCTTTGAAATTGTTTTATAAGAGAGCATTCAAATTTGACCATGGTGGATGTTGTCCAGAAGATCTCGTTGGTATAGCTAAAGAAATTGTTCAAAAATGTCAGGGCTTACCATTGGCAATTGTTGCCATTGGTGGTCTTTTGTCTACAAAAAAGAAGCATGTGTCTGAGTGGCAGCGATTTAGTGAAAATTTAAGTGCGGGTCTAAAGAAAGATACACAGTTAATGGGTATAAAAGAAGTTTTAGGCTTAAGTTACAATGATTTGCCTTACTATCTCAAGTCATGTTTGTTGTATTTTGGAATGTATCCAGAAGATTATCAAGTTAAATCATCTCGAGTTATTCGACAATGGATAGCTGAAGGGTTTGTGAAAGAGGAAAGGGGGGAGACTTTGGAAGAAGTTGCCGAAGGATATTTAACAGAACTGGTCCATAGAAGCTTGGTGCAGGTATCTTCAATTGGAATTGATGGTAAAGCTGAAAGTTATTGTGTTCATGATCAAATACGCGAGATGATCCTTGAAAAGTTTGAGGATTTAAACTTTTGCACGCAAACTAGTGAAGATGGAAATTCATCCTTAAGTGGAATAATTCGGCGCTTATCAATAACAACCACGTCCAATGATTTAACACCGTGTATTGAAAGCTCGCATGTTCGGTCACTGCTTGTTTTCACAGATGAACCAAGCATAATTTTTAAGGATGGAATTCCTAAAAATTACAAGTTGTTGACTGTTCTTGATTGTGAATCCACTTTCTTGTTGCACGTTCCTAAGAATTTGGGAAGTTACGTCCACTTGAAGTATTTAACCTTGAGGTATATTGAGGATTGTAAAAACCTAAAGTTCATTGGCAAGCTCCGTAGCCTAGAGACCTTGAATGTAAGTGATGCGGTTCTTGATTTGCCCAAAGAGATTAGCAAGCTTAGAAAGCTAAGACATCTTATCGGCAGGGAATTGTCTTTGACTCAATTAGAAGATGGTATTGGAGAGATGACATCCCTACAAACACTACATTCTGTTGATTTAGATACAGATGGAGCGGCAAAGATTATTAAAGGGTTAGGAAAGCTGAAGCAGATGAGGGATTTGGGGTTGCGTGATGTTCGTAGAGACGATGGAATCATTCTATCTTCGTCAATCAATGAAATGCAACACTTGGAAAAACTGGATATTGAATCAAGATGGCGGGGGGGTAAAAAGGGTAAAGAAGTCATTGATTTGGATTTGATTTCATTGCCAACTAATCTTCAAAAACTTAAATTAAATGGGAGGATTCTACAGATGTTGCGCGAATGGATTCCAAAGCTTCAAAATCTTGTTGAGTTGACTTTCTGGCACTGCGGTTTAACTGAAGATCCATTGCAATCACTAAAAAATTTGCCAAACTTGTTGTCCCTCGCTCTATATGGTTTCGCTTATGAAGGTTGTTTTCATTTTGAAGATGGATGTTTTCAGAAACTAAAGATCCTGGATGTTACATATTGCTATGAATTGAGAGGAGTTATTATTGACAAAGGAGCACTGCCTTCTCTGAAAAAGATAAACTTTAGTTATCTCCAGAAACTTGAGAATATACCCACTGGCATCCAACACTTGGAGAAGCTTGAAGATCTCCGTATTGTGGATATGTCAGATGAATTTGTGCAGAACATTTCTACTGAAGATTGGAATTCGATGCAGCATGTGCCCCTTGTACACATTTCTGGCCGTGATAGAATTTCTATTCCAAACCCAAGGAGTTAG 2775 0.3802 MAEMAVSFAIDKLLPLLTEEVNLLKGVHKEFADIKDELESIQAFLKDADRRAAAANGNNTDEGVKIWVKQLREAAFRIEDIIDNYMMHVEQQPRNPGCAALFNNFSYLFKNLKQRHQIASGIQDIKSLVCGIKERSKRYSFQRSFEQGSSSSSESQKSKLHPLREDALYIDEADVVGFEEPRKTLIDWMFDGSENPIVISVVGMGGQGKTTLVKKVFDNKDIIAHFDCRVWITMSQTYDVKEVLRDMLLKLYKQKGDNPPQNINQMDQRSLTEELRNYLKPKRYVVVFDDVWSVKFWDDIKFAVIDNKSGSKILITTRNEEVLVSCKISSFTQVLHLKHLTEDQSLKLFYKRAFKFDHGGCCPEDLVGIAKEIVQKCQGLPLAIVAIGGLLSTKKKHVSEWQRFSENLSAGLKKDTQLMGIKEVLGLSYNDLPYYLKSCLLYFGMYPEDYQVKSSRVIRQWIAEGFVKEERGETLEEVAEGYLTELVHRSLVQVSSIGIDGKAESYCVHDQIREMILEKFEDLNFCTQTSEDGNSSLSGIIRRLSITTTSNDLTPCIESSHVRSLLVFTDEPSIIFKDGIPKNYKLLTVLDCESTFLLHVPKNLGSYVHLKYLTLRYIEDCKNLKFIGKLRSLETLNVSDAVLDLPKEISKLRKLRHLIGRELSLTQLEDGIGEMTSLQTLHSVDLDTDGAAKIIKGLGKLKQMRDLGLRDVRRDDGIILSSSINEMQHLEKLDIESRWRGGKKGKEVIDLDLISLPTNLQKLKLNGRILQMLREWIPKLQNLVELTFWHCGLTEDPLQSLKNLPNLLSLALYGFAYEGCFHFEDGCFQKLKILDVTYCYELRGVIIDKGALPSLKKINFSYLQKLENIPTGIQHLEKLEDLRIVDMSDEFVQNISTEDWNSMQHVPLVHISGRDRISIPNPRS 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01210 924 Gene3D Ribonuclease Inhibitor 686 901 IPR032675 -
Trre5g01210 924 Gene3D - 4 119 - -
Trre5g01210 924 SUPERFAMILY L domain-like 508 891 - -
Trre5g01210 924 Gene3D - 435 519 IPR036388 -
Trre5g01210 924 PANTHER DISEASE RESISTANCE PROTEIN RP 33 869 IPR044974 GO:0006952
Trre5g01210 924 CDD RX-CC_like 2 134 IPR038005 -
Trre5g01210 924 Gene3D - 165 331 IPR027417 -
Trre5g01210 924 FunFam Probable disease resistance protein At1g61300 158 329 - -
Trre5g01210 924 FunFam Probable disease resistance protein At1g63360 429 518 - -
Trre5g01210 924 Gene3D - 339 433 IPR042197 -
Trre5g01210 924 Gene3D Ribonuclease Inhibitor 558 685 IPR032675 -
Trre5g01210 924 Pfam NB-ARC domain 184 430 IPR002182 GO:0043531
Trre5g01210 924 Pfam Rx N-terminal domain 5 96 IPR041118 -
Trre5g01210 924 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 443 IPR027417 -
Trre5g01210 924 PRINTS Disease resistance protein signature 278 292 - -
Trre5g01210 924 PRINTS Disease resistance protein signature 826 842 - -
Trre5g01210 924 PRINTS Disease resistance protein signature 198 213 - -
Trre5g01210 924 PRINTS Disease resistance protein signature 377 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01210 Trre-Chr5 8567098 8569872 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g01210 148 408 WRKY Transcription Factor Family AT4G12020 25.092 8.36e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01210 K13457 - gmx:100819372 881.708