Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01191 ATGTGTGACTCTGCAATTTCCTTAGCCCGTGATCACTTGCTTCCACTAATCCGTGATCATTTGCTTCCACTACTAACGGAAGCAACCAACATGATCAGGGGTATCCCAAAAGAAATTGCAGAAATGAAAGATGAAATTGAAAGCATTCAACAATTTATCAACAAAGCAGATAGATTGGCTGATGCTGAAGAGGACAACAAAAGCCAAGGAATCAGAGCAACAATTAAGCAGTTGATAGAAGCATCTTTTCGCGTAGAAGATGTCATTGATGAATATATTATCAATGAGGAACAACAAACTTCTGATCCTGGATGTGCTGCTGGTGCTATATTGTTCAATACTATGATTCTTCGTCTCAAAGTAGCCTACACGATTCAGAGCATTAAGTCCCGTATTAATGAAATCAAAGTTACAAGTGAAAAAGATCATGGTTTCCAAATCCAATCTTCTTCAGAACAAGGATCAAGTAGTTCGGTAAACCTAAATTCCACGTTATTGGAGAACCTTCGAAAGGCTCCATTATACATGGATGAAAATGATGTTGTGGGATTTGAAGAACCAAAAGATATACTCATTGAATGGCTGGTAAAGGGAAGAGCAGAACTCACAGTCGTCTCCGTGGTAGCAATGGGAGGGCAGGGAAAAACCACTCTAGCAAAGAAAGTTTTTGACAACGACAAGGTTGTTGAACGATTTAAGTATCGTGTATGGATCACAGTTTCTCAACCATACAGTGTAGAAGGACTTTTAAGGGACCTGTTACAAAAGTTATACAAACAAATGAACGGAGAGCTTCCTCGGAGTATTGATCAAATGGATCGAGACTCATTAGTTGACGAGGTGAGAACCACTTTGCGGCAAAAAAGGTATGTTGTTGTGTTTGATGATGTATGGAACATGCATTTTTGGGATGAAATTCAATTAGCTATGATTGATAACAAAAATGGTTCTAAGATATTAATCACAACAAGAAACATGGATGTTGCTAATGCTTGTAAGAAATTTTCTTTTGTTAAAGTGCATGAGCTAAAGAGTTTAACTAAAGAACAATCTTTGGATTTGTTCAATAAGAAGACATTCCGTGATTTGAACGGATGTTGTCCAGAAAATCTTATTGAGACATCTTCCAAAATCATTGAAAAATGCAATGGGTTACCACTAGCAATTGTGGTCATTAGTGGTCTTTTATCATGCAGATACCGAAATGCACTTGAATGGTATAAGTTTAGTGAAAACATAAGTTCAGAGTTAAAAGGCAAACATTCCTCGATAACAAAAATTTTAGGTCATAGTTACCATGATTTGTCTTACAATCTCAAGTCATGTTTGTTGTATTTTGGAATATTTCCTGAGGACTCTGTACTTTGTTCGAAGTCATTAATTCACCAATGGATTGCTGAAGGGTTCGTGAAAGATGACGGGGGAAGGACTTTGGAAGAGGTTGCCGAAGGATATTTAACAGAGTTGATACATAGAAATTTAGTGCAAGTAGTTTTAGTCAGTACTGATGGAAGAGCAAAATATTGTCGTGTTCATGATTTAGTACATGCGATGATCCTTGAATCATTTGAGGATTTAAGTTTTTGCAAGACTATTAGTGTTGATGGCCAGTCACCTTTAACTGGAATAACTCGACGCCTATCATTGACTATTAATTCAGATAATTTAATGGAAAGTATTAATAGCTCACATGTTCGATCACTATTTTATATTGGAGCTAACTTATCTGAATCCTTTGTAAGGAAAATTCCTATCAAATACAAGATGTTGAAGGTGCTTGTCCTAAAGGGTGAAGCAAGGTTTGAAATTTCTGAAGATTTGGGAAGTTTGATCCACTTGAAGTATTTGGAATTGAAGGGCATACATGTAGAAAATTTCGATGTAACTCTGAAATCCATTGGCATGCTTGAGAACCTTGAGACCTTGGATTTAACTGGATGTAAATATTTCTGTAAAATTCCAAAGGAGATTTGCAAGCTCAAAAAACTTCGCCATTTTAAAGGCTACTATGTTTCTTTGATTGAATTGAAGGATGATCTTGGAGGTTTGACATCCTTACAAACTCTCCGTGGGGTTCATTTATATGAAGATGAAGATGAAGATGAAGATGAAGATGATAGTGATAATAGATGGATAGATCTAATACAAGAGCTAGGAAAGCTAAAACAACTAAGGGAATTGGGCTTGTGCGGTGTTAAGACTATATATATGAGTGCTCTATCTTCTTCAATCAATGAAATGCAACTACTGGAGAAACTGTTTATTGAATCAGTCGATGAAGACACAGTCATTGATATGCATTTGAATTCACCACCACCTATGCTTCGACATCTTAAACTTACTGGGCCATTAGAGAAGTTGCCTGAGTGGATTCCAAAACTTCAAAATCTTGTTAAGTTGAAACTTAACTACTCCTGTCTAAATCATGATATAATGGAACCACTCAAAAGCATGCCAAACTTGTTGTCCCTCTGTCTTAGGGAACATGCTTTTGAAGGCGAAAGGTTACATTTTCAAGATGGATGGTTTAAGAATTTGAAGCAACTAATTCTTACACGTATGTACGGCTTGAATTGCATCCTTATTGATGAAGGCGCATTGCCTTCTCTAGAAACTCTCGAATTACGTTACATCCCCGAACTCAAGACGGTACCAGCAGGCATTCAACACTTAAAGAAGCTTAAACAACTCCGGACTCCACTTGTGATTTATTACACAGGTGATGGTTGGCTTCAGCGTGTACAATCGAATATTAGCTTCAATCCGTAG 2769 0.3698 MCDSAISLARDHLLPLIRDHLLPLLTEATNMIRGIPKEIAEMKDEIESIQQFINKADRLADAEEDNKSQGIRATIKQLIEASFRVEDVIDEYIINEEQQTSDPGCAAGAILFNTMILRLKVAYTIQSIKSRINEIKVTSEKDHGFQIQSSSEQGSSSSVNLNSTLLENLRKAPLYMDENDVVGFEEPKDILIEWLVKGRAELTVVSVVAMGGQGKTTLAKKVFDNDKVVERFKYRVWITVSQPYSVEGLLRDLLQKLYKQMNGELPRSIDQMDRDSLVDEVRTTLRQKRYVVVFDDVWNMHFWDEIQLAMIDNKNGSKILITTRNMDVANACKKFSFVKVHELKSLTKEQSLDLFNKKTFRDLNGCCPENLIETSSKIIEKCNGLPLAIVVISGLLSCRYRNALEWYKFSENISSELKGKHSSITKILGHSYHDLSYNLKSCLLYFGIFPEDSVLCSKSLIHQWIAEGFVKDDGGRTLEEVAEGYLTELIHRNLVQVVLVSTDGRAKYCRVHDLVHAMILESFEDLSFCKTISVDGQSPLTGITRRLSLTINSDNLMESINSSHVRSLFYIGANLSESFVRKIPIKYKMLKVLVLKGEARFEISEDLGSLIHLKYLELKGIHVENFDVTLKSIGMLENLETLDLTGCKYFCKIPKEICKLKKLRHFKGYYVSLIELKDDLGGLTSLQTLRGVHLYEDEDEDEDEDDSDNRWIDLIQELGKLKQLRELGLCGVKTIYMSALSSSINEMQLLEKLFIESVDEDTVIDMHLNSPPPMLRHLKLTGPLEKLPEWIPKLQNLVKLKLNYSCLNHDIMEPLKSMPNLLSLCLREHAFEGERLHFQDGWFKNLKQLILTRMYGLNCILIDEGALPSLETLELRYIPELKTVPAGIQHLKKLKQLRTPLVIYYTGDGWLQRVQSNISFNP 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01191 922 CDD RX-CC_like 19 136 IPR038005 -
Trre5g01191 922 PANTHER DISEASE RESISTANCE PROTEIN RP 40 867 IPR044974 GO:0006952
Trre5g01191 922 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 446 IPR027417 -
Trre5g01191 922 Gene3D - 432 520 IPR036388 -
Trre5g01191 922 FunFam Probable disease resistance protein At1g61300 166 335 - -
Trre5g01191 922 Gene3D - 160 340 IPR027417 -
Trre5g01191 922 FunFam Probable disease resistance protein At1g63360 432 521 - -
Trre5g01191 922 Gene3D - 345 431 IPR042197 -
Trre5g01191 922 PRINTS Disease resistance protein signature 382 396 - -
Trre5g01191 922 PRINTS Disease resistance protein signature 634 650 - -
Trre5g01191 922 PRINTS Disease resistance protein signature 284 298 - -
Trre5g01191 922 PRINTS Disease resistance protein signature 204 219 - -
Trre5g01191 922 Coils Coil 39 59 - -
Trre5g01191 922 SUPERFAMILY L domain-like 511 898 - -
Trre5g01191 922 Gene3D Ribonuclease Inhibitor 521 901 IPR032675 -
Trre5g01191 922 Pfam NB-ARC domain 185 432 IPR002182 GO:0043531
Trre5g01191 922 Pfam Rx N-terminal domain 20 101 IPR041118 -
Trre5g01191 922 Gene3D - 16 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01191 Trre-Chr5 8426721 8429628 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g01191 201 389 WRKY Transcription Factor Family AT5G45050 27.513 5.11e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01191 K13457 - gmx:100819372 785.023