Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01190 ATGTGTGATCCATGTGCAAGTGTATTTTCTTGTGCTCGTGAAAACTTGCTTCCACTAGCTCGTAAATATTTGTTTCCAGTAGCCCTTGATCATTTGCTTCCTATACTAAAGGAAACTGTCAACATGATTAGGGGTATCCCAGATGACGAAATTGCACACATGAAACATGAACTTGAAACCATTGAAGACGCCATCCATCAAGCAGATAAAATGGCTGATGCTGAAGGAGATGACCTAGCTGATGGAACCAGAGTAAAGATCAAGCAGCTGATGGAAGCATTTTATCACATACAAGATGTCATTGATGAATACATCATCCGTGAGGAGCAACAACTTCCAGATCCTGGATGTGTTGATGGTGCTTCTGACTATGTCAAAACTAAGATGCTCCGTCTCCAAATTGCCCATGATATTCAGAACATCAAATCCCGAATTGGTGAAATAAAAGATACTAGTTCTGAAAAGGATCATGAAGCTTCAAGCAGTTCTGCAACAAACCTGAAAGCCACATCATTGCAGAACCTTCGAATGGCTCCATTTAACATGGCTGAAACAGATGTTGTAGGCTTTGAAAAGCCAACAAACAAATTGGTTGATTGGCTGGTAACGGGAAGAACAGATCTCATGGTTGTCTCCGTGGTAGCAATGGGAGGACAGGGAAAAACAACTCTAGCCAAAAAAGTATTTGACAACAACGAAGTGGTTAAACACTTTGATTGTCATGTATGGATCACAGTGTCAAAATCAAACAATATAGAAGTGCTGAGAGGCATGTTGGAGGAGCTCTACAATCAACAAAAAGTCAATCCTCCTCAGAGTATTGAAAAAATGACTAGAGAGTCATTAATCGGTGAAGTGAAAAACTGCTTGCAGGAGAAAAGGTACGTTGTAGTGTTTGATGATGTATGGGACTCGAATTTTTGGGATTATATTAAATTGGCTATGATCGATGAAAAAAAGGGTCGTAGAATATTAATCACAACAAGGGATATGAAAGTTGTTAATGCTTGTAGGACATCATCTTTTGTTGAAATTCATGAATTGGAATGTTTACCTTATCAACAATCTTTGGAATTGTTTAATAAGAAGGCATTCCATGATTTGAAAGGATGTTGTCCGGAAAATCTTGTTAATATTTCTACTGAAATTGTTCAAAAATGCTTTGGATTACCACTAGCTATTATAGTCATAGGTGGTCTTTTATCAAGTAGAAATAGAGATTCATCTGAATGGAATAGGTTTAATACAAATTTAAATTTAGAGTTAAAAAAAAATTCCATGATAAAAATCATTTTAGGTCAGAGTTACCATGATTTGCCTTACAACCTCAAGTCATGTGTTTTGTACTTTGGATTATATCCTGAAGACCGTATAGTTCCTTCGAATATGTTAACTAAACAATGGATGGCTGAAGGGTTTGTGAAAGAAGATAGGGGAATGACGTTGGAAGAGGTTGCGGAAGGATATTTAACAGAGTTGATCCGTAGAAGTTTGGTTCAGGTAGTTTCAATTAGTATTGATGGAAGAGTAGAGAGTTGTCGTGTTCATGACCTAGTGCATGCAATGATCCTTGAAAAATGTGAGGATTTATGTTTTTGCAAGAATATTTTTGAGGGCCAACAATCATCTTTAACCGGAATGATTCGACGTCTAACAATAAGAACCACAAATTTAGATAATTTAATGACAAGTATTCAACGCTCCCATGTTCGGTCACTATTAGTTCTCACTTCTAAAAAGTTACCTGAATCCTTTGAAAGGGAAATCCTTACAAATTGTAGGTTCTTGAAGGTGCTTGATTTTGAGGATAATGAAAAAGATCTTGAAGTTGGAGGTTTGAGCCACTTGAAATATTTCAGGTCCCCGAAGGAGAAAATCTATGGTGGTCTTCAAAATACACTTCTAAAATCTATTGGCATGCTCGAGAACCTAGAGACCTTGAATTTAAGAAAGCTACATTTTAAATTGAAATTGCCAAAGGAGATTTGCAAGCTTAGAAAGCTACGGCATTTATTAGGCAGCGAAATGTCTTTAATTTTGATGAAGGAAGGTATTGGAGGCATGACATCCCTACAAACTCTAAGTCGAGTTTATTTAGATAAAGGTGAAAAGGATAATAGTGTAGTAGAGCTAATCCAAGAGCTAGGAAAGCTAAAAGAGTTAAGGGAATTGGTCTTAGAAGATGTTAGGGGTAAACATATGGGGGCTCTATCTTCGTCTATTAGTGAGATGCAACAATTGGAGAAACTATGCATTAATGAGACTACACCTTCCTATGAACCCATTGATCTGCATTTGAATTCACCCCCACCTAAGCTTCAAATCCTTAAATTGCAGGGAGAGTTTGAGAAGTTGCCCGAGTGGATTTCAAAACTTCAAAATCTTGTTATGTTGGATCTTCAACCTTCCATTTTAAGATATGATCCTACACTGAAATTACTCAGAGATTTGCCAAACTTGTTGTCTCTCACTCTCGACTACTGTCCCAGTAACAGTGAACTCAGCTTTTTAACATTTCAAGCTGGATCTTTTAAAAATTTGAAGGAACTGACTATTTTTGATTTGAGAAGCTTGGAACGTATCGATATTGACAAAGGCGCATTGCCTTCTCTAAAAATGTTCAGCATATCCGTCATGGACGAATTCCGGGGTTATTTACCATATGGCATTGAACACTTAGAGAAGCTTGAACATCAGAGCATGATGATCCGGAGCCGTGGCAGAGAAAGCAATAAAAATTTGGGTGATGGCCCGCCAGTTGTGTGTGATGTATTATATATGTTGTGTGAGCTTTCCCTTGAATAA 2805 0.3743 MCDPCASVFSCARENLLPLARKYLFPVALDHLLPILKETVNMIRGIPDDEIAHMKHELETIEDAIHQADKMADAEGDDLADGTRVKIKQLMEAFYHIQDVIDEYIIREEQQLPDPGCVDGASDYVKTKMLRLQIAHDIQNIKSRIGEIKDTSSEKDHEASSSSATNLKATSLQNLRMAPFNMAETDVVGFEKPTNKLVDWLVTGRTDLMVVSVVAMGGQGKTTLAKKVFDNNEVVKHFDCHVWITVSKSNNIEVLRGMLEELYNQQKVNPPQSIEKMTRESLIGEVKNCLQEKRYVVVFDDVWDSNFWDYIKLAMIDEKKGRRILITTRDMKVVNACRTSSFVEIHELECLPYQQSLELFNKKAFHDLKGCCPENLVNISTEIVQKCFGLPLAIIVIGGLLSSRNRDSSEWNRFNTNLNLELKKNSMIKIILGQSYHDLPYNLKSCVLYFGLYPEDRIVPSNMLTKQWMAEGFVKEDRGMTLEEVAEGYLTELIRRSLVQVVSISIDGRVESCRVHDLVHAMILEKCEDLCFCKNIFEGQQSSLTGMIRRLTIRTTNLDNLMTSIQRSHVRSLLVLTSKKLPESFEREILTNCRFLKVLDFEDNEKDLEVGGLSHLKYFRSPKEKIYGGLQNTLLKSIGMLENLETLNLRKLHFKLKLPKEICKLRKLRHLLGSEMSLILMKEGIGGMTSLQTLSRVYLDKGEKDNSVVELIQELGKLKELRELVLEDVRGKHMGALSSSISEMQQLEKLCINETTPSYEPIDLHLNSPPPKLQILKLQGEFEKLPEWISKLQNLVMLDLQPSILRYDPTLKLLRDLPNLLSLTLDYCPSNSELSFLTFQAGSFKNLKELTIFDLRSLERIDIDKGALPSLKMFSISVMDEFRGYLPYGIEHLEKLEHQSMMIRSRGRESNKNLGDGPPVVCDVLYMLCELSLE 934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01190 934 Gene3D - 26 144 - -
Trre5g01190 934 Gene3D - 436 525 IPR036388 -
Trre5g01190 934 Gene3D - 170 345 IPR027417 -
Trre5g01190 934 Gene3D - 351 435 IPR042197 -
Trre5g01190 934 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 174 449 IPR027417 -
Trre5g01190 934 PANTHER DISEASE RESISTANCE PROTEIN RP 55 868 IPR044974 GO:0006952
Trre5g01190 934 FunFam Probable disease resistance protein At1g63360 436 525 - -
Trre5g01190 934 PRINTS Disease resistance protein signature 387 401 - -
Trre5g01190 934 PRINTS Disease resistance protein signature 289 303 - -
Trre5g01190 934 PRINTS Disease resistance protein signature 210 225 - -
Trre5g01190 934 PRINTS Disease resistance protein signature 845 861 - -
Trre5g01190 934 Pfam NB-ARC domain 191 424 IPR002182 GO:0043531
Trre5g01190 934 MobiDBLite consensus disorder prediction 146 166 - -
Trre5g01190 934 Pfam Rx N-terminal domain 28 111 IPR041118 -
Trre5g01190 934 Coils Coil 51 71 - -
Trre5g01190 934 Gene3D Ribonuclease Inhibitor 526 932 IPR032675 -
Trre5g01190 934 FunFam Probable disease resistance protein At1g61300 169 341 - -
Trre5g01190 934 SUPERFAMILY L domain-like 514 898 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01190 Trre-Chr5 8418242 8421284 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g01190 207 406 WRKY Transcription Factor Family AT5G45050 28.218 1.38e-10 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01190 K13457 - gmx:100819372 695.656