Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01184 ATGGCAGATATGGCCGTGTGTTTAGTTCTTGACCAACTGATTCCACTGTTAAGGGAAGAAGCCAAGCTGTGGGGAGGTATTCACAAAGAATTTGCAGACATTAAAGATGAACTTGATTGCATTCAAGCCTTTCTTAAGGATGCTGATAAAAGAGTTGCAGCGGTTGAAGGAGACAACACTAACGAAGGAGTCAAAACATGGGTGAAGCAGGTTAGAGAAGCAGCTTTCCGTATTGAAGATGTCATTGATGATTATCTTATCCAAGTGAGACAGCGGTCTCGTGATCCTGGATGTGTAGCTTTACTCCGTAAGATTGTTCACTCACTCAAAGTTATTGCCCATCGTCATCAAATAGCGTCTGAGATTCAAGATATTAAGTCATTTGTTCGTGGGATCAAGGAAAGAAGCGAAAAATATGGCTTTCAAAGTTCTTTGGAACAAGGATCGAGAAGCTTTAGAGCAAGCAAAACTGCCAAATGGCACGACCCTCGAATGGCTGCTTTATACGTTGATGAAGCGGAAATTGTAGGCTTTCAAGCACCCAAAAATAGGTTGATTGGATGGTTGATAGAGGGAAGATCTGAGCGCACTGTCATCTCTGTGGTAGGTATGGGAGGGCTAGGAAAAACCACTCTCGCCAAAAAAGTTTTTGACGACAAAGCGGTAGTGAGACACTTTGATTATCGTGTATGGATCACAGTGTCACAATCATACCATATAGAAGGGTTGCTGAGAGGTATGTTGAGCGAGCTTTACAAACAAAAAAGGGACTCTCCTCCTAGAGATATCTCTCAAATGGATCGAGAGTCTTTGATTTCTGAGCTTAGACACTACTTGCAACAGAAGAGGTATGTTTTCGTGTTTGATGATGTATGGAACATACATTTTTGGGATGAGATTGAAAATGCATTGATTGATGATAAAAATGGGAGTAAAATATTTATTACAACAAGAAAAATGGATGTTGTTTTATGCTCTAAGAAATCTTCTTTTGTCGAAGTGCATGAATTGCAACCTTTAACAAAAGAACAATCTTTTGAGTTGTTTAATAAGAAGGCATTCCGATTTGAATTTGATGGATCTTGCCCAAAAGAGCTCATTGATATATCTTTCGAAATTGCTAGAAAATGCAAGGGTTTGCCACTAGCAATTGTTGCCATTGGTGGTCTATTGTCTACAAAAGCGAAAAACGTATATGAGTGGCAAAGATTTTGTAAAAATATGACTTTAGAACTAAAGAAGGATTCTCATTTGACCGGGATAAACAAAATTTTAGCTCTCAGCTACGATGATTTGCCTTTTCATCTTAAGTCATGTTTGTTGTATTTTGGAATGTATCCAGAAGATTTCATAGTTAAATCAAAGAGACTAATTCGACAGTGGATAGCTGAAGGATTTGTGAAAGAAGAAAGTGGGAATACGTTGGAAGAAGTGGCAGAAGGATATTTAACAGAGTTAATCCATAGAAGTTTGGTGCAAGTATCTTCTCTTAGAATTGATGGAAAAATTAAAAGTTGTTGTGTTCATGATCTAATACGTGTGATGATTCTTGAAAAGTGTGAAGATTTAAGTTTCTGCAAGCATATCATCAATGAAGATGGTTGTTCATCTTTATATGGAATTATTCGACGCCTATCAATAACAACCCATTCCGATGATTTTCCAACATGTATTGAAAACTCACATGTTCGTTCACTATTTCTCTTCACAAATGAGTCACAATTTTTGAGCGAAGATTTTATGAGGAGAATCTTTACAAAATATAGGCGCTTGAAGGTGCTTGAGTTTGAAGTTTATTCTGAAGTTAAATTGAGTAATATCCTTCATGAAAATTTGGGAAGCTTGATTCACTTGAAATATTTAAGTTTCATGAATCTTTCTGCGGAAACTCGAATTGAACTTCCCAAATCAATTGCCATGCTCCAAAACCTGGAGACTTTGGTTCTAAGACATGAGGTAGGCTATAAAATACCAAAGGAGGTTAGCAAGCTTAGAAAGTTACGACATCTTCTGGGCATCAGAATGTCTTTGTTTCAATTGAAGGGTAGTATAGGAGGCATGAAATCTCTACAAACTCTGAGTAATGTGGTAATTGATGATGATGGAATAGAGCTAATTAAAGAGCTGGGAAAGCTAAAGCAGTTAAGGAAGTTGAGCTTGTTTCTTGTGAACGAAGACCATATAAGCACTTTATCTTCTTCATTGAATGAGATGCAACATTTGGAGAGTCTAAACATTGGGACAAAAAACAACTTTATCCTAGACTTTAAGGAACTGGAAATCATAAGCCATCCAACGTCAAGGGGGAGAAAAGGTGGTTGGCTTCTAGTGCGATGGAAATTCATATTACTCCAAGTGGACTTCTACAACAATGGCATCTTTATTTATGTTCATGCTTTTGCACTTTAG 2409 0.374 MADMAVCLVLDQLIPLLREEAKLWGGIHKEFADIKDELDCIQAFLKDADKRVAAVEGDNTNEGVKTWVKQVREAAFRIEDVIDDYLIQVRQRSRDPGCVALLRKIVHSLKVIAHRHQIASEIQDIKSFVRGIKERSEKYGFQSSLEQGSRSFRASKTAKWHDPRMAALYVDEAEIVGFQAPKNRLIGWLIEGRSERTVISVVGMGGLGKTTLAKKVFDDKAVVRHFDYRVWITVSQSYHIEGLLRGMLSELYKQKRDSPPRDISQMDRESLISELRHYLQQKRYVFVFDDVWNIHFWDEIENALIDDKNGSKIFITTRKMDVVLCSKKSSFVEVHELQPLTKEQSFELFNKKAFRFEFDGSCPKELIDISFEIARKCKGLPLAIVAIGGLLSTKAKNVYEWQRFCKNMTLELKKDSHLTGINKILALSYDDLPFHLKSCLLYFGMYPEDFIVKSKRLIRQWIAEGFVKEESGNTLEEVAEGYLTELIHRSLVQVSSLRIDGKIKSCCVHDLIRVMILEKCEDLSFCKHIINEDGCSSLYGIIRRLSITTHSDDFPTCIENSHVRSLFLFTNESQFLSEDFMRRIFTKYRRLKVLEFEVYSEVKLSNILHENLGSLIHLKYLSFMNLSAETRIELPKSIAMLQNLETLVLRHEVGYKIPKEVSKLRKLRHLLGIRMSLFQLKGSIGGMKSLQTLSNVVIDDDGIELIKELGKLKQLRKLSLFLVNEDHISTLSSSLNEMQHLESLNIGTKNNFILDFKELEIISHPTSRGRKGGWLLVRWKFILLQVDFYNNGIFIYVHAFAL 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01184 802 PRINTS Disease resistance protein signature 198 213 - -
Trre5g01184 802 PRINTS Disease resistance protein signature 377 391 - -
Trre5g01184 802 PRINTS Disease resistance protein signature 736 752 - -
Trre5g01184 802 PRINTS Disease resistance protein signature 278 292 - -
Trre5g01184 802 Gene3D Ribonuclease Inhibitor 555 767 IPR032675 -
Trre5g01184 802 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 443 IPR027417 -
Trre5g01184 802 FunFam Probable disease resistance protein At1g63360 429 518 - -
Trre5g01184 802 Gene3D - 161 334 IPR027417 -
Trre5g01184 802 Pfam NB-ARC domain 180 431 IPR002182 GO:0043531
Trre5g01184 802 CDD RX-CC_like 2 134 IPR038005 -
Trre5g01184 802 Gene3D - 4 119 - -
Trre5g01184 802 Pfam Rx N-terminal domain 5 95 IPR041118 -
Trre5g01184 802 Gene3D - 429 520 IPR036388 -
Trre5g01184 802 FunFam Probable disease resistance protein At1g61300 159 330 - -
Trre5g01184 802 PANTHER DISEASE RESISTANCE PROTEIN RP 33 761 IPR044974 GO:0006952
Trre5g01184 802 Gene3D - 339 428 IPR042197 -
Trre5g01184 802 SUPERFAMILY RNI-like 549 753 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01184 Trre-Chr5 8375951 8379116 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g01184 199 396 WRKY Transcription Factor Family AT5G45050 26.131 5.13e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01184 K13457 - mtr:25489074 991.875