Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01156 ATGGCTCTTCATATTCCCAACTTGTTCACCCTTTTTACTATTTTTCTGTTCATGATAATTGCATTAAAAATTTGGAATCATAACAAAAAATATAATTCAAGTACTAAAAATAGTCCCCCAGGTCCATGGAAACTACCCATTATAGGAAATATTCTCAATCTTGTTACAACAAACCCACATAGAAAATTAAGAGATTTAGCTAAAATATATGGACCCTTGATGCATCTACAACTTGGTGAGGTATTCTTTGTTGTTGTTTCCTCACCAGAAGTTGCTAGAGAGGTTCTGAAAACCCATGATATTATCTTTGCATCAAGGCCTCATCTTCTAGCAGGGGAGATAGCATGTTATAACTCAACAGATATAGCTTTTTCACCTTATGGTGATTACTGGAGACAACTTAGAAAGATTTGCGCTGTCGAGCTTTTGAGCTCGAGAAGGGTCAAATCTCTTTGGCCAGTAAGAGAGAATGAAATTAGTTCTCTGTTAAAAAAGATTGCTTCAAATGAAGGATCAGAAATCAATCTTACTCAAGAACTTATTTCAATGATGTATACATTCACTTCAAAGGCTGCATTTGGTAAGAAATATTTGGAACCAGAAGAGTTCATATCGGTTGTAAAACAATTTGTAAAACTTGCAGGAGGGTTCTACATTGGTGACTTGTTTCCTTCAGCTAAATGGATTCAAAATCTCTCTGGAATGAGGCCTAAGCTTGAGAAGTTAAGCCAACAAGTAGATATGATTCTAGAACATATAATCAATGACCATAAGGAGGCGAGATCAAGAAGAGCTAAACAAGGTTTGGCTGAAGCAGAGGAAGATCTGATTGATTGTCTTTTAAAATTTGAGGACAATGACGGTGACATGGATTTTCATTTAACTTCTGATAATATTAAGGCCATAATATTGGATGTCTTCTCTGCTGGAAGTGAGACTGCATCAACTACGATTAATTGGGCAATGGCTGAGATGATAAAAGATCCAAGAGTTTATAAGAAAGCACAAGCTGAAGTGAGGGAGGGGTTCAATAGAAGAGGAAAGGTTGATGAAGCAGCAATTGATGAGTTCAAATATTTGAAAGCAATAATGAAAGAGTCACTGAGATTACACCCTACAGTTCCTCTCCTTGTTCCAAGGGAATGTGGACAAGTTTGTGAGATTAATGGCTATCACATACCTGTCAAAAGTAGAGTGCTAGTAAATGCTTGGGCCATTGGAAGGGATCCGAAATATTGGAATGATCCAGATAAGTTTTATCCTGAAAGGTTTATTGATAGCTCTATTGATTACAAAGGAACTAATTTTGAGTACATTCCATTTGGTGCTGGAAGGAGAATTTGTCCGGGTATGAATTATGGTATGGTAAGTGTTGAACATGTCCTTGCACTTTTATTGTATCATTTTGATTGGAGGCTTCCGAATGGAATAAAAAATGAGGAATTAGAGTTGAAAGAAGAGTTTGGAGCTACTATGTCAAGAAAAGGCGATCTTTACTTGATTCCCACAACTTCTCATCCTTTGCTTGTAACATAA 1536 0.3646 MALHIPNLFTLFTIFLFMIIALKIWNHNKKYNSSTKNSPPGPWKLPIIGNILNLVTTNPHRKLRDLAKIYGPLMHLQLGEVFFVVVSSPEVAREVLKTHDIIFASRPHLLAGEIACYNSTDIAFSPYGDYWRQLRKICAVELLSSRRVKSLWPVRENEISSLLKKIASNEGSEINLTQELISMMYTFTSKAAFGKKYLEPEEFISVVKQFVKLAGGFYIGDLFPSAKWIQNLSGMRPKLEKLSQQVDMILEHIINDHKEARSRRAKQGLAEAEEDLIDCLLKFEDNDGDMDFHLTSDNIKAIILDVFSAGSETASTTINWAMAEMIKDPRVYKKAQAEVREGFNRRGKVDEAAIDEFKYLKAIMKESLRLHPTVPLLVPRECGQVCEINGYHIPVKSRVLVNAWAIGRDPKYWNDPDKFYPERFIDSSIDYKGTNFEYIPFGAGRRICPGMNYGMVSVEHVLALLLYHFDWRLPNGIKNEELELKEEFGATMSRKGDLYLIPTTSHPLLVT 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01156 511 FunFam Cytochrome P450 71D8 31 502 - -
Trre5g01156 511 Pfam Cytochrome P450 39 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01156 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Trre5g01156 511 Coils Coil 255 275 - -
Trre5g01156 511 Gene3D Cytochrome P450 23 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01156 511 CDD CYP71-like 70 498 - -
Trre5g01156 511 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01156 511 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01156 511 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01156 511 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01156 511 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01156 511 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01156 511 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01156 511 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01156 511 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01156 511 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01156 511 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01156 511 SUPERFAMILY Cytochrome P450 39 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01156 511 PANTHER OS08G0105600 PROTEIN 62 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01156 Trre-Chr5 8178518 8180365 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g01156 11 502 Cytochrome P450 AT3G26310 40.600 1.38e-136 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01156 - - gmx:102665189 677.937