Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01155 ATGGCTCCATTAGTCCTCTACTTTGCATATGTTTTCTCCTTTGTCCTCTTAACCTTTATGGTACAAAAAATAAGAAAGAAGAAAAGTTACACAACTTATAACATACCAGGAGGGCCTACAAAGCTACCCATTATAGGAAATATACACAACCTGTTAAGCTCTCAACCCCATAGGAAATTAAGAGACTTGGCCAAAAAATATGGACCTGTAATGCATCTTCAACTTGGAGAGGTTTCGACTATTGTCATTTCATCACCCGAGTGTGCTAGTGAGGTGATGAAAACCCATGATATTCACTTTGCATCAAGGCCTAAAATCCTTGCTACAGAAATACTGTCTTACAATTCTACAAATATAGCTTTTGCTCCTTATGGTAATTATTGGAGACAGCTAAGAAAAATATGCACAATGGAGCTTTTAAGCCTAAAAAGGGTAAACTCATACCAACCAATTAGAGAAGAAGTGTTTTGCAATCTTGTCAAATGGATTGCTTCACAGAACGGATTGCCAATCAATCTCACCGAAGCTATACTTTCTTCAATATTCACAATTGTTTCGAGGGCTGCCTTTGGCAATAAATGCAAAGACCAAGAAAAATTTATATCAGTGGTAAAACAATCAATAAAGGTTGCAGCGGGTTTCAACTTGGGAGATTTGTTTCCCTCAGCTAAATGGCTACAGCATGTTACTGGTTTGAGGCCTAAGCTTGAGAAGTTTCAGAAACAAACTGATCAGATATTAGAAAATATCATCAATGAGCATAAAGAGGAAAAGTACACAAAGGCCAAACATGATCAAGGTGAATTAGAAGATCTGGTAGATGTTCTCTTAAATTATGAGGATGGTAGTGACCAGGACTTTTCCTTAACAAAAAACAATATCAAGGCTATAATCCTGGACATTTTTGGTGCTGGAGGTGAAACATCAGCAAGCACCATAGATTGGGCAATGGTAGAAATGATAAGGGATCCAAGAATAATGAAGAAAGCACAAGCTGAGCTTCCAAGTGGAATCAGAAGTGAAGAATTGGACATGACTGAGGAATTTGGAGTCGCAGTGAGAAGAAAAGATGATCTTTTATTATTTCCTTTTGTTTATCATCCTTTGAATGTCACATAA 1119 0.3718 MAPLVLYFAYVFSFVLLTFMVQKIRKKKSYTTYNIPGGPTKLPIIGNIHNLLSSQPHRKLRDLAKKYGPVMHLQLGEVSTIVISSPECASEVMKTHDIHFASRPKILATEILSYNSTNIAFAPYGNYWRQLRKICTMELLSLKRVNSYQPIREEVFCNLVKWIASQNGLPINLTEAILSSIFTIVSRAAFGNKCKDQEKFISVVKQSIKVAAGFNLGDLFPSAKWLQHVTGLRPKLEKFQKQTDQILENIINEHKEEKYTKAKHDQGELEDLVDVLLNYEDGSDQDFSLTKNNIKAIILDIFGAGGETSASTIDWAMVEMIRDPRIMKKAQAELPSGIRSEELDMTEEFGVAVRRKDDLLLFPFVYHPLNVT 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01155 372 SUPERFAMILY Cytochrome P450 36 340 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01155 372 Gene3D Cytochrome P450 28 350 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01155 372 PIRSF L_ASNase 202 332 - -
Trre5g01155 372 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 12 339 - -
Trre5g01155 372 Pfam Cytochrome P450 36 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01155 372 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01155 372 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01155 372 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01155 372 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01155 372 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01155 372 PIRSF L-ASNase_gatD 231 326 IPR006034 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01155 Trre-Chr5 8171118 8172838 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g01155 10 354 Cytochrome P450 AT3G26310 36.538 3.98e-72 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01155 - - tpra:123912942 572.007