Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01154 ATGGCTCTATTATTCCTCTACTTTGCATATCTTTTCTCATTTCCCCTTTTAACCATTACCATACAAAAGATTATAAGAAAGAAGAAAAGTAACTCTACTTATATCATACCACGAGGGCCTAGAAAGCTACCAATTATAGGAAATATACACAATCTATTAAGCTCCCAACCCCATCAAAAATTAAGAGACTTGGCTAAAAAGTATGGACCTGTAATGCATCTTCAACTTGGAGAAGTTTCAACTATTGTCATTTCATCACCCGAGTGTGCTAGCGAGGTGATGAAAACCCATGATATTCACTTCGCAACAAGGCCACAAATCCTAGCTACAGAAATAATGACTTACAATTCAACAAGTATAGCCTTTTCTCCTTATGGTAATTATTGGAGACAGTTACGAAAAATATGCAGATCGGAGCTTTTAAGCTTAAAAAGGGTCAATTTGTACCATCCAATTAGAGAAGAGGTGCTCTCCAATCTTGTCAAATGGATTGCTTCAGAGAATGGATCGCCAGTAAACCTCACTGAAGCTGTAATTTCTTCAATATACACCATTGTTTCCAGGGCCGCCTTTGGCAATAAATGCAAAGACCAAGCAAATTTTATATCAGTGATAAAAGAAACAATAAAGGTTTCAGCAGGTTTTAACTTAGCAGATTTGTTTCCTTCTGCTAAATGGCTACAGCGTGTTACTGGCAAAGATGATCAAGGTGTAGAAGAAGATCTGGTAGATGTTCTATTAAAATACGAGGATGGTAGCAACCAGGATTTTTCCTTAACAAAAGACAATATCAAGGCCATAATCATGGATATGTTTGGTGCTGGAAGCGAGACATCCGCAAACACCATAGATTGGGCAATGGTAGAAATGCTTCCTAGTGGAATCACAAGTGAAGAATTGGACATGACTGAGGAATTTGGAGTCAAATTGAGAAGAAAAGATGATCGTTTATTGCTACCTTTTTCTTATCATCCTTTGTCTGTCAAGTGA 990 0.3737 MALLFLYFAYLFSFPLLTITIQKIIRKKKSNSTYIIPRGPRKLPIIGNIHNLLSSQPHQKLRDLAKKYGPVMHLQLGEVSTIVISSPECASEVMKTHDIHFATRPQILATEIMTYNSTSIAFSPYGNYWRQLRKICRSELLSLKRVNLYHPIREEVLSNLVKWIASENGSPVNLTEAVISSIYTIVSRAAFGNKCKDQANFISVIKETIKVSAGFNLADLFPSAKWLQRVTGKDDQGVEEDLVDVLLKYEDGSNQDFSLTKDNIKAIIMDMFGAGSETSANTIDWAMVEMLPSGITSEELDMTEEFGVKLRRKDDRLLLPFSYHPLSVK 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01154 329 Gene3D Cytochrome P450 30 292 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01154 329 PRINTS E-class P450 group I signature 263 280 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01154 329 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01154 329 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01154 329 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 237 292 - -
Trre5g01154 329 Pfam Cytochrome P450 239 291 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01154 329 Pfam Cytochrome P450 37 229 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01154 329 SUPERFAMILY Cytochrome P450 37 291 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01154 Trre-Chr5 8167880 8169808 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g01154 1 329 Cytochrome P450 AT1G13110 34.783 3.60e-59 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01154 - - tpra:123912942 437.958