Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01152 ATGCATCTTCAACTTGGAGAGGTTTCTGCTATTGTCATTTCATCACCCGAGTGTGCTAGAGAGGTGATGAAAACCCATGATATTCACTTTGCAACAAGGCCTCAAATCCTAGCTACAGAAATAATGTCTTACAATTCGACAAATATTGCTTTTGCTCCTTATGGTAATTATTGGAGACAGGTACGCAAAATCTGCACATTGGAGCTTTTAAGCCTAAAAAGGGTAAACTCATACCAACCGATTAGAGAAGAGGTGTTCTCCAATCTTATCAAATGGATTGCTTCACAGAATGGAACACCAATCAACCTTACTGGAGCTGTACTTTCTACAATATACACAATTGTTTCAAGGGCCGCCATAGGGAATAAATGCAAAGACCAAGAAAAATTTATATCAGTGGTAAAACAAACATTAAAGATTGCAGCGGGTTTTGACTTGGGAGATTTGTATCCTTCTGCTAAATGGCTACAACGTGTTACTGGTTTGAGGCCAAAGCTTGAGAGGTTTCAACGACAAACTGATCAGATATTAGAAAACATCATCAATGACCATAAAGTGGCAAAGTATACAAAAGCCAAAGCTGATCAAGGTGGAGTAGTAGAAGAAGACCTTTTAGACGTTCTCTTAAAATACGAGGATGGTAGCAACCAGGATTTTTCCTTAACAAAAGACAATATCAAGGCCATAATCCTGGACATTTTTGGTGCCGGAGGTGAGACATCAGCAAGCACCATAGATTGGGCAATGGTAGAAATGATAAGGGATCCAAGAACAATGAAAAAAGCACAAGTTGAGGTGAGAGAGCTTTTCAAAATGAAAGGAAGGGTTGATGAAAATTACATCAACGAGCTCAATTACTTGAAATTAGTTGTCAAAGAAACTCTAAGGTTACACCCTCCACTACCTCTTTTGCTACCAAGAGAATGTGGTCAAGCATGTGAGATAAATGGTTATCATATACCGATTAAGACTAAGGTGATAGTCAATGCTTGGGCAATTGCAAGAGATCCAAACTACTGGACTGAACCAGAGAGGTTTTATCCAGAGAGATTCATTGACAACAATTTTGACTATAAAGGGAGTAATTTTGAGTACACTCCTTTTGGTGCTGGAAGAAGAATATGCCCGGGGAGCACATTTGGTTTGAGAAATATTGATCTGGCTCTTGCGATGTTGTTGTATCATTTTGACTGGAAGCTTCCAAATGGAATCAGAAGTGAAGAATTGGACATGACTGAGGAATTTGGAGTCGCAGTGAGAAGAAAAGATAATCTTTTATTGTTTCCTTCTGTTTATCATCCTTTGCATGTCACATGA 1317 0.388 MHLQLGEVSAIVISSPECAREVMKTHDIHFATRPQILATEIMSYNSTNIAFAPYGNYWRQVRKICTLELLSLKRVNSYQPIREEVFSNLIKWIASQNGTPINLTGAVLSTIYTIVSRAAIGNKCKDQEKFISVVKQTLKIAAGFDLGDLYPSAKWLQRVTGLRPKLERFQRQTDQILENIINDHKVAKYTKAKADQGGVVEEDLLDVLLKYEDGSNQDFSLTKDNIKAIILDIFGAGGETSASTIDWAMVEMIRDPRTMKKAQVEVRELFKMKGRVDENYINELNYLKLVVKETLRLHPPLPLLLPRECGQACEINGYHIPIKTKVIVNAWAIARDPNYWTEPERFYPERFIDNNFDYKGSNFEYTPFGAGRRICPGSTFGLRNIDLALAMLLYHFDWKLPNGIRSEELDMTEEFGVAVRRKDNLLLFPSVYHPLHVT 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01152 438 Gene3D Cytochrome P450 1 426 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01152 438 CDD CYP71-like 1 425 - -
Trre5g01152 438 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 368 377 IPR017972 GO:0005506|GO:0016705
Trre5g01152 438 PANTHER OS08G0105600 PROTEIN 1 434 - -
Trre5g01152 438 SUPERFAMILY Cytochrome P450 2 427 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01152 438 FunFam Cytochrome P450 99A2 1 430 - -
Trre5g01152 438 PRINTS E-class P450 group I signature 329 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01152 438 PRINTS E-class P450 group I signature 245 271 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01152 438 PRINTS E-class P450 group I signature 375 398 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01152 438 PRINTS E-class P450 group I signature 365 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01152 438 PRINTS E-class P450 group I signature 288 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01152 438 PRINTS E-class P450 group I signature 18 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01152 438 PRINTS E-class P450 group I signature 225 242 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01152 438 Pfam Cytochrome P450 3 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01152 438 PRINTS P450 superfamily signature 236 253 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01152 438 PRINTS P450 superfamily signature 289 300 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g01152 438 PRINTS P450 superfamily signature 366 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01152 Trre-Chr5 8160926 8162417 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g01152 1 431 Cytochrome P450 AT3G26310 42.727 1.55e-125 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01152 - - tpra:123912942 809.29