Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01134 ATGTCTTTCTTTCTTCGAACCTTCTTCTTATTCTCTCTTCTTTTCCTTCTCTTCTTCTCCTCTGTTTCTTCTCACGGTGGCCACGACGACGGCGACACCGATGCCGACTCTGATGCTGCAGCCACTAACAACCTCCGTTCAAAACCATTAATCCTAGCAAAAATTTGGTGCTTAATTTTAATCTTTTTAGCTACTTTCATTGCTGGTATTTCACCTTATGCATTGAGATGGAATGAAGGGTTTTTGATTCTAGGGACACAGTTTGCTGGTGGAGTTTTTCTAGGAACTGCTTTGATGCATTTTCTTAGTGATGCAAATGAGACTTTTGGTGATTTGACTGAAAAAGAATACCCTTTTGCTTTCATGTTGGCTTGTGCTGGTTATTTGATTACTATGCTTGCTGATTGTGTTATTTCTTCTCTTTTGGAAAAGCCTCATGGTGCTTCTGATATTGAAGTTGCAGGGGTAGACAAAGGAAGGAGCAATGATGTTACTTCTGATCAGTCAAAATATCAGGGTTCTTCTGACACCAATGATCATGTATGTAGTACTTCAATCGGAGATAATGTATACATATTTATTTATGTATACATAATCGCCCTTTGTGCTCACTCAGTTTTCGAGGGCTTAGCAATCGGAATTTCTGAGACAAAAGCAGACGCTTGGAAAGCATTGTGGACAATCTGTTTACACAAGATATTTGCAGCCATTGCAATGGCCATTGCGCTCCTCCGGATGGCTCCTAACCGATCTCTACTATCGGTTGCAACCTATGCTTTCGCCTTTGCAATCTCTAGTCCAATTGGTGTCGCCATTGGGATTGTATTAGATTCCACAACACAAGGCCATGCCGTTGATTGGACTTTTGCTATATCTATGGGTTTAGCTTGTGGTGTGTTTATTTATGTATCAATAAACCATCTATTTGCAAAGGGTTATGTGGGTGAAAAACATTCAAAAGTTGATTCAGCCTATATGAAATTTCTTGCAGTGTCGTTAGGAATAGGAGTTATAGCTGTTGTTATGATATGGGATACCTAA 1041 0.3977 MSFFLRTFFLFSLLFLLFFSSVSSHGGHDDGDTDADSDAAATNNLRSKPLILAKIWCLILIFLATFIAGISPYALRWNEGFLILGTQFAGGVFLGTALMHFLSDANETFGDLTEKEYPFAFMLACAGYLITMLADCVISSLLEKPHGASDIEVAGVDKGRSNDVTSDQSKYQGSSDTNDHVCSTSIGDNVYIFIYVYIIALCAHSVFEGLAIGISETKADAWKALWTICLHKIFAAIAMAIALLRMAPNRSLLSVATYAFAFAISSPIGVAIGIVLDSTTQGHAVDWTFAISMGLACGVFIYVSINHLFAKGYVGEKHSKVDSAYMKFLAVSLGIGVIAVVMIWDT 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01134 346 MobiDBLite consensus disorder prediction 161 178 - -
Trre5g01134 346 PANTHER ZINC/IRON TRANSPORTER 53 340 - -
Trre5g01134 346 MobiDBLite consensus disorder prediction 159 178 - -
Trre5g01134 346 Pfam ZIP Zinc transporter 52 341 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01134 Trre-Chr5 7983042 7985502 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g01134 24 346 Inorganic Solute Cotransporters AT1G55910 58.308 4.93e-128 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01134 K14709 - gmx:100809940 436.417