Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01131 ATGTCTTTCTCTCTTAGAACTTTCTTCTTATTCTCTCTTCTTCTTCTTCTCTTCTTCTTCACCACTGTTTCTTCTCACGGTGGCAGCAACGGCGACGACGACGGCGACACCGATACCGACGCAGATGCCAAGGAAGACACTCACGATCACAACCTCCGTTCAAAATCATTAATCCTAGCAAAAGTTTGGTGCTTAATTGTAATCTTTTTCGCCACTTTCATTGCTGGTGTTTCACCTTATTTGTTGAGATGGAATGAAGGGTTTTTGATTCTAGGGACACAGTTTGCTGGTGGAGTTTTTCTAGGAACTGCTTTGATGCATTTTCTGAGTGATGCAAATGAGACTTTTAGTGATTTGACTGAAAAAGAATACCCTTTTGCTTTCATGTTGGCTTGTGCTGGTTATTTGATTACTATGCTTGCTGACTGTGTTATTTCTTCTCTTTTGGAAAAGCCTCATGGTTCTGCTGATGTTGAAGGTCAAGAGGCAGACAAAGCAAGGAGCAATGGTGTTACATCTCAGTCCGAATATCAGGCCTCTTCCGACACCAATTACCGTGATCTTACTTCTAGTACTTCAATCGGAGATACTGTCTACATATTTATTTATGTATACATAATCGCCCTTTGCGCTCATTCTGTTTTCGAGGGTTTAGCAATCGGAGTTTCTGAGACGAGAGCAGACGCTTGGAAAGCATTATGGACAATCTGTTTGCACAAGATATTTGCAGCCATTGCAATGGGTATTGCGCTCCTTAGGATGGTTCCTAATCGGCCTCTACTATCAGTTGCAGCCTATGCTTTCGCTTTTGCAATCTCTAGTCCAATTGGTGTCGCGATTGGGATTGTATTAGATTCCACAACAGAAGGTCATGTAGCTGATTGGACTTTTGCTATATCTATGGGTTTAGCTTGTGGTGTGTTTATCTATGTTTCAATAAACCATCTATTTGCAAAGGGTTATATAGCTCACAAACATTCAAAGGTTGATACGCCTTATATGAAGTTTCTCGCAGTGTCGTTGGGAATAGGAGTTATAGCTGTTGTTATGATATGGGATACCTAA 1065 0.4113 MSFSLRTFFLFSLLLLLFFFTTVSSHGGSNGDDDGDTDTDADAKEDTHDHNLRSKSLILAKVWCLIVIFFATFIAGVSPYLLRWNEGFLILGTQFAGGVFLGTALMHFLSDANETFSDLTEKEYPFAFMLACAGYLITMLADCVISSLLEKPHGSADVEGQEADKARSNGVTSQSEYQASSDTNYRDLTSSTSIGDTVYIFIYVYIIALCAHSVFEGLAIGVSETRADAWKALWTICLHKIFAAIAMGIALLRMVPNRPLLSVAAYAFAFAISSPIGVAIGIVLDSTTEGHVADWTFAISMGLACGVFIYVSINHLFAKGYIAHKHSKVDTPYMKFLAVSLGIGVIAVVMIWDT 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01131 354 MobiDBLite consensus disorder prediction 159 178 - -
Trre5g01131 354 Pfam ZIP Zinc transporter 59 349 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Trre5g01131 354 MobiDBLite consensus disorder prediction 27 46 - -
Trre5g01131 354 PANTHER ZINC/IRON TRANSPORTER 60 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01131 Trre-Chr5 7947493 7955674 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g01131 38 354 Inorganic Solute Cotransporters AT1G55910 59.385 4.70e-132 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01131 K14709 - gmx:100809940 462.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g01131 5 7947493 7955674 Trre5g01131 5 7947493 7955674 ECH