Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01130 ATGTCTTTCTCTCTTAGAACTTTCTTCTTATTCTCTCTTCTTCTTCTTCTCTTCTTCTTCACCACTGTTTCTTCTCACGGTGGCAGCAACGGCGACGACGACGGCGACACCGATACCGACGCAGATGCCAAGGAAGACACTCACGATCACAACCTCCGTTCAAAATCATTAATCCTAGCAAAAGTTTGGTGCTTAATTGTAATCTTTTTCGCCACTTTCATTGCTGGTGTTTCACCTTATTTGTTGAGATGGAATGAAGGGTTTTTGATTCTAGGGACACAGTTTGCTGGTGGAGTTTTTCTAGGAACTGCTTTGATGCATTTTCTGAGTGATGCAAATGAGACTTTTAGTGATTTGACTGAAAAAGAATACCCTTTTGCTTTCATGTTGGCTTGTGCTGGTTATTTGATTACTATGCTTGCTGACTGTGTTATTTCTTCTCTTTTGGAAAAGCCTCATGGTTCTGCTGATGTTGAAGGTCAAGTGCAAATTGCAGAGGCAGACAAAGCAAGGAGCAATGGTGTTACATCTCAGTCCGAATATCAGGCCTCTTCCGACACCAATTACCGTGATCTTACTTCTAGTACTTCAATCGGAGATACTGTCTACATATTTATTTATGTATACATAATCGCCCTTTGCGCTCATTCTGTTTTCGAGGGTTTAGCAATCGGAGTTTCTGAGACGAGAGCAGACGCTTGGAAAGCATTATGGACAATCTGTTTGCACAAGATATTTGCAGCCATTGCAATGGGTATTGCGCTCCTTAGGATGGTTCCTAATCGGCCTCTACTATCAGTTGCAGCCTATGCTTTCGCTTTTGCAATCTCTAGTCCAATTGGTGTCGCGATTGGGATTGTATTAGATTCCACAACAGAAGGTCATGTAGCTGATTGGACTTTTGCTATATCTATGGGTTTAGCTTGTGGTGTGTTTATCTATGTTTCAATAAACCATCTATTTGCAAAGGGTTATATAGCTCACAAACATTCAAAGGTTGATACGCCTTATATGAAGTTTCTCGCAGTGTCGTTGGGAATAGGAGTTATAGCTGTTGTTATGATATGGGATACCTAA 1077 0.4113 MSFSLRTFFLFSLLLLLFFFTTVSSHGGSNGDDDGDTDTDADAKEDTHDHNLRSKSLILAKVWCLIVIFFATFIAGVSPYLLRWNEGFLILGTQFAGGVFLGTALMHFLSDANETFSDLTEKEYPFAFMLACAGYLITMLADCVISSLLEKPHGSADVEGQVQIAEADKARSNGVTSQSEYQASSDTNYRDLTSSTSIGDTVYIFIYVYIIALCAHSVFEGLAIGVSETRADAWKALWTICLHKIFAAIAMGIALLRMVPNRPLLSVAAYAFAFAISSPIGVAIGIVLDSTTEGHVADWTFAISMGLACGVFIYVSINHLFAKGYIAHKHSKVDTPYMKFLAVSLGIGVIAVVMIWDT 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01130 358 MobiDBLite consensus disorder prediction 27 46 - -
Trre5g01130 358 PANTHER ZINC/IRON TRANSPORTER 60 352 - -
Trre5g01130 358 Pfam ZIP Zinc transporter 59 353 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01130 Trre-Chr5 7947493 7955674 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g01130 38 358 Inorganic Solute Cotransporters AT1G55910 58.055 1.71e-131 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01130 K14709 - gmx:100791239 463.381