Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01129 ATGGCGGAAATGGCGGTGTCTTTAGTTGTTGGCCAACTAATTCCACTGTTAAGGGAAGAAGCCAAACTGTTTAGAGGCATCCATAAGGAGTTTACATACATTAAAGATGAACTTGAAAGCATTCAAGCATTCCTTAAGGATGCTGATAAAAGAGCTGAAGGAGACAACACTAGTGAAGGAGTCAAAACTTGGGTGAAGCAAGTTAGGGAGTTAGCTTTTCGCATTGAAGATATCATTGATGATTATTTGATCAAGGTGGTACCGCAGCCTCGTGATCATCCTCGATGTGTAGCTTTACTCCATAAGCTCAAAACTATGACCCCTCGCCATCAAATAGCATATGAGATTCAAGACATCAAGTCATCTGTTATTGAGATCTCGGAAAGAAGTAAAAGATACGATTTCCAACGTTCTTTTGAACAAGGATCCAGTAATTCTAGAGGAGGCCGGAATGCCACATGGCATGACCCTCGATTGGCTGCTCTTTACATTGAGGAGGCTGAAGTTGTGGGCTTTGAAATACCAAGAAAAACATTGATTGAGTGGATGGTAAAGCAAACGGAAGAACGCACTGTTGTTTCCGTGGTGGGAATGGGAGGGCAAGGAAAAACAACTCTTGCGAAGAAAGTGTTTGACGACAAAGACATTATTAGACACTTTGATTGTCGCGTATGGATCACAGTGTCTCAATCATATAACATTGAAGAGTTGTTGAGAGATATGCTGCTAAAGTTTTACAAACAAAGAGGAGACAATGCTGGGGATATTTCTCAAATGAATCGAGCTTCATTGATCGATGAAGTCAGAAACTACTTGCAGGAAAAGAGGTATGTTGTTGTGTTTGATGATGTTTGGAGTTCACGTTTTTGGGATCATATTGAATTAGCTTTATTTGATAATAAAAATGGAAGTAAGATATTGATCACAACTAGGAACCTAGATGTTATTGTGCCTTGTAAAAGATCTTCTTCCTCCGTTGAAGTTCTTGAGTTGGAACCTTTAACTCAAGAACAATCCTTGGAGTTGTTCAATAAGAAAGCATTTAGATTTGACTATGGTGGATGTTGTCCAAAGGAACTCATTGACATATCTTATGAAATTGTTAAAAAATGTAAGGGTTTACCACTAGCAATTGTTGTCATTGGTGGTCTTTTGTCAACAAGAGAGAAAAATGTGTTTCAGTGGCAGAGATTTAGAGAAAATCTAAGTTTAGAACTAAAGAAAGATACACATCTAAGTGAGATAAAAGAGATTTTGGGTTTAAGTTACAATGATTTGCCTTACTATCTCAAGCCATGTTTGTTGTATTTTGGAATATATCCAGAAGATTATGAAGTTAAATCAAAGAGAGTGACTCGCCAGTGGATAGCTGAAGGGTTTGTGAAGGAGGAAAGAGGAAAGACTTTGGAAGAAGTTGCAAAAGAATATTTAACAGAGTTGATTCATAGAAGTCTGGTACAAGTATCTTCGCTTAGATTTAATGGTAAAGCCAAAGGTTGTCGTATTCACGATCTAATACGCAGTTTGATCCTTGAGAAAATTGAGGATTTAAATTTTTGCAAGCATATTAGTGAAGATGGACAATCATCGTCAAGTGGAATAACTCGGCGCCTATCAATAACAACCATTTCCAATGATTTAATAGAGTCTACTGAAAGTTCACATATTCGATCCCTGTTTTTTTTTATAAAAAGTAACCATGACTATTCACTCACCCAGAACTTTGCAAAAAGAATCCCTAGAAAATATAGGTTGCTGAAGGTTCTTGATTATGAATCTTTTCCATTAATGAAAGTTCCTAAGAAATTGGGAAATTTTTACCACTTGAAATATTTAAGCTTCAGGCATGCAGCAGCATTTGAAGAGGTCCCAAAATCCATTGGCATGCTCCAGAACCTAGAGACCTTGGATGTAAGGCATTCACAGATCCGTGAATTGCCAAATGAGATTCGCAAGCTTAGAAAGCTAAGACATCTTAGGGGCCACATAGTGTCTTTAATTAAATTAAAGGATGGCATTGGAGAGATGACATCCCTACAAACGCTGAGTTTAGTTCTATTAGATATAGATGGATTTAAAGAGTTAGGAAAGCTGAAGCAGATGAGGGTATTGGGATTGTGTGTTGATGCAAAATATGGAAGCACTCTAGCTTCCGCACTCAATGAAATGCAACACTTGGAGAAACTAAATTTAATGGATAATCCAATTGAAGTCCATGATTTGGATTTGATTTCATCGCCAAAACTTCAAAAGCTTGAACTATATGTGAGGTTACAAAAGTTGCCAGTGTGGATTCCAGAGCTTCAAAATCTAGTTGTGTTGAGCTTGGTACGCTCCAATTTAACCAAAGATCCAATGGAATCACTAAAATGTTTGCAACACTTGTTGTTCCTCACTCTAGAGAATCAAGCATATGAAGGTTTATATTTGCATGTTGAAGCTGGAGGGTTTCAGAAACTAAAGGAATTGCATGTTATAGAATTAACTGAACTGCAAGATATTGTTATCGACAAAGGAGCATTGCCTTCTCTGAAAAAGCTGAGTTTATCCTTTCTTCTCAGTTTGAAGAATATACCTAATGGAATCAAACACTTAGAGAAGCTTGAAGTTCTCCATATACTTAATATGCAAGAGTTAATTGGAAATCAAGTTGGGAAAGAAAAGGTGTTGAGCTTCAACTTCAAGTGCAGTGGCAATTCAGATTCTACCACAGGGACTTTTACTACAATACTTTGGCACTTATGTTCCTCAATAAAAATTATATGTTTTATCTTTCTTTAA 2781 0.37 MAEMAVSLVVGQLIPLLREEAKLFRGIHKEFTYIKDELESIQAFLKDADKRAEGDNTSEGVKTWVKQVRELAFRIEDIIDDYLIKVVPQPRDHPRCVALLHKLKTMTPRHQIAYEIQDIKSSVIEISERSKRYDFQRSFEQGSSNSRGGRNATWHDPRLAALYIEEAEVVGFEIPRKTLIEWMVKQTEERTVVSVVGMGGQGKTTLAKKVFDDKDIIRHFDCRVWITVSQSYNIEELLRDMLLKFYKQRGDNAGDISQMNRASLIDEVRNYLQEKRYVVVFDDVWSSRFWDHIELALFDNKNGSKILITTRNLDVIVPCKRSSSSVEVLELEPLTQEQSLELFNKKAFRFDYGGCCPKELIDISYEIVKKCKGLPLAIVVIGGLLSTREKNVFQWQRFRENLSLELKKDTHLSEIKEILGLSYNDLPYYLKPCLLYFGIYPEDYEVKSKRVTRQWIAEGFVKEERGKTLEEVAKEYLTELIHRSLVQVSSLRFNGKAKGCRIHDLIRSLILEKIEDLNFCKHISEDGQSSSSGITRRLSITTISNDLIESTESSHIRSLFFFIKSNHDYSLTQNFAKRIPRKYRLLKVLDYESFPLMKVPKKLGNFYHLKYLSFRHAAAFEEVPKSIGMLQNLETLDVRHSQIRELPNEIRKLRKLRHLRGHIVSLIKLKDGIGEMTSLQTLSLVLLDIDGFKELGKLKQMRVLGLCVDAKYGSTLASALNEMQHLEKLNLMDNPIEVHDLDLISSPKLQKLELYVRLQKLPVWIPELQNLVVLSLVRSNLTKDPMESLKCLQHLLFLTLENQAYEGLYLHVEAGGFQKLKELHVIELTELQDIVIDKGALPSLKKLSLSFLLSLKNIPNGIKHLEKLEVLHILNMQELIGNQVGKEKVLSFNFKCSGNSDSTTGTFTTILWHLCSSIKIICFIFL 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01129 926 PANTHER DISEASE RESISTANCE PROTEIN RP 34 844 IPR044974 GO:0006952
Trre5g01129 926 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 437 IPR027417 -
Trre5g01129 926 FunFam Probable disease resistance protein At1g63360 423 512 - -
Trre5g01129 926 CDD RX-CC_like 2 128 IPR038005 -
Trre5g01129 926 Gene3D - 429 513 IPR036388 -
Trre5g01129 926 Pfam Rx N-terminal domain 5 90 IPR041118 -
Trre5g01129 926 Gene3D Ribonuclease Inhibitor 549 899 IPR032675 -
Trre5g01129 926 Gene3D - 4 113 - -
Trre5g01129 926 PRINTS Disease resistance protein signature 839 855 - -
Trre5g01129 926 PRINTS Disease resistance protein signature 271 285 - -
Trre5g01129 926 PRINTS Disease resistance protein signature 192 207 - -
Trre5g01129 926 PRINTS Disease resistance protein signature 371 385 - -
Trre5g01129 926 SUPERFAMILY L domain-like 501 879 - -
Trre5g01129 926 FunFam Probable disease resistance protein At1g61300 157 323 - -
Trre5g01129 926 Gene3D - 157 328 IPR027417 -
Trre5g01129 926 Pfam NB-ARC domain 178 425 IPR002182 GO:0043531
Trre5g01129 926 Gene3D - 333 427 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01129 Trre-Chr5 7940494 7943472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g01129 180 382 WRKY Transcription Factor Family AT5G45050 31.579 1.92e-10 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01129 K13457 - mtr:25489074 907.516