Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01099 ATGATACCAGTCCAAAGAACAAGTTTTAAGGATGTCTACTTGGTTTATGAACTCATGGATACTGATCTTCATCGTATTATCAAGTCATCTCAGTCACTTTCCAATGATCATTGCAAATTTTTCATGTTTCAGCTACTTGAAGGTCTTAACTATCTCCATTCTGCAAATATTCTTCACCGGGACTTGAAGCCTGCGAATCTGCTTGTCAATGCAAATTGTGATTTGAAGATATGTGACTTCGGACTTGCCCGAACCAGTCAAGTTGATGGCGAAAGTATGACTGAGTATGTTGTCACGCGATGGTATCGTGCTCCAGAGCTTCTATTAGGATGTGACAATTATGGAACCTCTATCGACATGCGGTCTGTAGGATGCATTTTTGCCGAGATTCTTGGTAGAAAGCCAATTTTCCCTGGAAAAGATTCTCTGGACCAAATGAAACTAATTGTAAATGTTCTTGGAAGCCAACATGAGTCTGATCTTGAATTTATTGATAATCCAAAAGCTAAGAGGTTTATCAAATTACTAACCTATACACAAGGGACACCCTTCTCTCATCTATACCCACTAGCAGATCCATTAGCCTATTTTAATGTGTCACCCTCATGA 609 0.3924 MIPVQRTSFKDVYLVYELMDTDLHRIIKSSQSLSNDHCKFFMFQLLEGLNYLHSANILHRDLKPANLLVNANCDLKICDFGLARTSQVDGESMTEYVVTRWYRAPELLLGCDNYGTSIDMRSVGCIFAEILGRKPIFPGKDSLDQMKLIVNVLGSQHESDLEFIDNPKAKRFIKLLTYTQGTPFSHLYPLADPLAYFNVSPS 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01099 202 FunFam Mitogen-activated protein kinase 21 196 - -
Trre5g01099 202 ProSitePatterns Serine/Threonine protein kinases active-site signature. 57 69 IPR008271 GO:0004672|GO:0006468
Trre5g01099 202 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 187 - -
Trre5g01099 202 Gene3D Transferase(Phosphotransferase) domain 1 19 195 - -
Trre5g01099 202 Pfam Protein kinase domain 9 174 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre5g01099 202 SUPERFAMILY Protein kinase-like (PK-like) 9 192 IPR011009 -
Trre5g01099 202 ProSiteProfiles Protein kinase domain profile. 1 202 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre5g01099 202 Gene3D Phosphorylase Kinase; domain 1 2 18 - -
Trre5g01099 202 SMART serkin_6 1 195 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01099 Trre-Chr5 7699973 7700691 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g01099 1 195 MAP Kinase Gene Family AT2G18170 80.000 1.10e-115 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Trre5g01099 Pkinase 8.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01099 K20537 K20535 rcu:8279136 334.339