Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01083 ATGATGGCTACTAGTGCAGTTGCATCTTTGCCCAAATTACCACCAGTAAGAAGAGGTAGCCACTGCATTGAAGAGAATGTTGTTCCTACATCTAAATTTCCAAGATTAGTACTGGCTGTAAATAATTCAAGATCACTCAGCTGTACACAGTTTCCACTTGGTAGAAGAACTCGTTCTCAGGCAGCAACTACAATATGTGCTGCAGCTTTGAATGCAAGATGTAGTGCCGAGCAAACTCAGACTATTACTCGAGAGGCTCCGACAATTACCCATCTTCCTGGTAAGGAGAAGTCCCCACAACTCGATGATGGTGGAAGTGGATTTCCACCTCGTGATGATGATGACGGTGGGGGAGGAGGTGGAGGTGGCGGCAACTGGTCTGGTGGATTTTTCTTTTTTGGGTTCCTTGCTTTTCTTGGTTTCTTAAAGGACAAAGAAAGTGATGATGATGATGGTTATGCTTACAGCGATAACAGAAGAAGGGGGTATTGA 492 0.4451 MMATSAVASLPKLPPVRRGSHCIEENVVPTSKFPRLVLAVNNSRSLSCTQFPLGRRTRSQAATTICAAALNARCSAEQTQTITREAPTITHLPGKEKSPQLDDGGSGFPPRDDDDGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESDDDDGYAYSDNRRRGY 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01083 163 MobiDBLite consensus disorder prediction 77 121 - -
Trre5g01083 163 PANTHER PROTEIN FERTILITY RESTORER RF2, MITOCHONDRIAL 2 155 IPR040299 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01083 Trre-Chr5 7587470 7589465 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g01083 53 161 C2H2 Transcription Factor Family AT1G56200 68.468 1.05e-19 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01083 - - tpra:123915156 172.94