Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01082 ATGCAACTTTATCTTGAGGAAGCACGAGATATAATGGCCATTGAAGATATCATCATTTGTGGGTTCTCTCTCTGCACATCAATGATGGCTACTAGTGCAGTTGCATCTTTGCCCAAATTACCACCAGTAAGAAGAGGTAGCCACTGCATTGAAGAGAATGTTGTTCCTACATCTAAATTTCCAAGATTAGTACTGGCTGTAAATAATTCAAGATCACTCAGCTGTACACAGTTTCCACTTGGTAGAAGAACTCGTTCTCAGGCAGCAACTACAATATGTGCTGCAGCTTTGAATGCAAGATGTAGTGCCGAGCAAACTCAGACTATTACTCGAGAGGCTCCGACAATTACCCATCTTCCTGGTAAGGAGAAGTCCCCACAACTCGATGATGGTGGAAGTGGATTTCCACCTCGTGATGATGATGACGGTGGGGGAGGAGGTGGAGGTGGCGGCAACTGGTCTGGTGGATTTTTCTTTTTTGGGTTCCTTGCTTTTCTTGGTTTCTTAAAGGACAAAGAAAGTGATGATGATGATGGTTATGCTTACAGCGATAACAGAAGAAGGGGGTATTGA 573 0.438 MQLYLEEARDIMAIEDIIICGFSLCTSMMATSAVASLPKLPPVRRGSHCIEENVVPTSKFPRLVLAVNNSRSLSCTQFPLGRRTRSQAATTICAAALNARCSAEQTQTITREAPTITHLPGKEKSPQLDDGGSGFPPRDDDDGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESDDDDGYAYSDNRRRGY 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01082 190 PANTHER PROTEIN FERTILITY RESTORER RF2, MITOCHONDRIAL 27 182 IPR040299 -
Trre5g01082 190 MobiDBLite consensus disorder prediction 110 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01082 Trre-Chr5 7587470 7591071 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g01082 80 188 C2H2 Transcription Factor Family AT1G56200 68.468 2.70e-19 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01082 - - tpra:123915156 181.03