Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01068 ATGAGTGATTCTCTTTACAAAGTTGAAACAACACCTCGTCTTGCTCAATGGAGAATCGAAAATTTGGCCTCTTGCACTTATCGCAAATCAGATCCTTTCAAGATTGGAAACTGGAATTGGTATTTGTCGGTGGAGAAACACAGGGTTGTGTTTGTTAAATTGTTCCCTGAAATATCCAATGTTACAAGAGACAATCCTCCAATTGCATCTTTTATCATGCGCGTGGTTAGTTCGGCTTTTGGAGATCGAAAAGCTATCACTCATCCAGAGATAAAGGACAAAGTGATCAAGAGTAATGAGGATTTTGTTTGGTCACTTGAGATTCCACTGTCTGGAAAATTCATTATTGATGTTGATTTCCTTGATTTGAAGATTGCATCCCCAGATGGTGGAGAACCTTGCTCCATATGGGGTGGTGAAGGATTTACTCAAGAGAGATCAAATGCAAGAGCTTTAGGGTCTCTTGGTATAATGTTAAGAGAAAGCATTCACACTGATATCACCATCAATACCTCTGATGGAAGTATAGGAGTTCATAGAGCTGTTCTTTCGTCTCGGTCACCTGTCTTCCGGAGCATGTTTTCGCACGATCTTAAGGAGAAAGAATTGTCAACCATAAACATCACAGACATGACAATTGAAACATGCCAAGCTTTTTTCAATTATCTTTACGGGATCATCAAAAACGAAGAATTTCTGACACATAGGCTGGCCCTTCTGCATGCAGCCGACAAGTACGACATATCTGACTTGAGAGAAGCCATTCATGAAAGTCTGCTGGAAGATATTGACACTAAAAATGTACTTGAGAGACTCCAAAATGCATCACTATATCGGTTGACGAAACTGAAGACAAGTTGTATTCAATACCTTGTTAAATTTGGTAAAATATTTGAAATTCGGGACGATTTCAATACCTTCCTCCAAAATGCGGATAGGGATCTGATTACTGAAGTCTTTACGGAAATTATCGGTGTCTGGAAAGGATATTGA 993 0.3927 MSDSLYKVETTPRLAQWRIENLASCTYRKSDPFKIGNWNWYLSVEKHRVVFVKLFPEISNVTRDNPPIASFIMRVVSSAFGDRKAITHPEIKDKVIKSNEDFVWSLEIPLSGKFIIDVDFLDLKIASPDGGEPCSIWGGEGFTQERSNARALGSLGIMLRESIHTDITINTSDGSIGVHRAVLSSRSPVFRSMFSHDLKEKELSTINITDMTIETCQAFFNYLYGIIKNEEFLTHRLALLHAADKYDISDLREAIHESLLEDIDTKNVLERLQNASLYRLTKLKTSCIQYLVKFGKIFEIRDDFNTFLQNADRDLITEVFTEIIGVWKGY 330
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01068 330 PANTHER OS08G0495500 PROTEIN-RELATED 6 329 IPR044714 -
Trre5g01068 330 SMART BTB_4 165 263 IPR000210 GO:0005515
Trre5g01068 330 ProSiteProfiles BTB domain profile. 165 224 IPR000210 GO:0005515
Trre5g01068 330 CDD BTB_POZ_ZBTB_KLHL-like 164 246 - -
Trre5g01068 330 Gene3D Potassium Channel Kv1.1; Chain A 143 293 IPR011333 -
Trre5g01068 330 Pfam BTB/POZ domain 161 261 IPR000210 GO:0005515
Trre5g01068 330 SUPERFAMILY POZ domain 150 261 IPR011333 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Trre5g01068 Trre-Chr5 7465120 7467375 Dispersed/Wgd
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Trre5g01068 BTB 4.7e-19 CL0033
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01068 K10523 - gmx:100790186 564.688
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g01068 5 7465120 7467375 Trre5g01068 5 7465120 7467375 ECH