Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01067 ATGAGTTTCTCTATTTTCCACCTTATCTCATTCTTTCTTCTTTGCTCTACTTTCTTGTACCAATCTTCTCATGCCATAAAAAAGTCTTATATTGTGTACTTAGGATCACATTCTCATGGACCAAACCCTTCAGCAAGTGATCTTCAATCTGCAACAAATTCACATTACAATTTACTTGGCTCACACTTGGGAAGTCATGAGAAGGCTAAGGAATCAATATTTTACTCATATAATAAACACATTAATGGTTTTGCTGCTGTACTTGAAGTAGAAGAAGCAACAAAACTTGCAAAACATCCAAATGTAGTGTCTTTGTTTGAGAACAAAGGGCATGAATTGCAAACCACAAGATCATGGGAATTTCTTGGGCTAGAGAATAATAATGGAGTGGTTCCTAAAGACTCTATATGGGAGAAGGCAAGATATGGTGATGGTACAATCATTGCTAACATTGATACAGGTGTTTGGCCCGAGTCCAAAAGTTTTAGCGATGATGGAATGGGTCCTGTCCCATCAAGGTGGCGGGGGATCTGCCAACTTGATAATTTTCATTGCAATAGGAAATTGATAGGAGCAAGATTTTACAGCAAAGGTTATGAATCAAAATTTGGCAGACTGAACCAATCCTTTTACACCGCGCGAGACTTATTAGGCCATGGCACACCAACATTATCAATCGCCGGTGTAACGGTAGTTACTGGTGGAGGTATTTCAGGACCGAAATTTGGAACTGTTACTAATTTGGCACCTTGGTTGTTTAGTGTTGGTGCTAGCACCATAGTCACACGGTTCTCAATTCGTTTCGATAGAAGCTTTGTTAGTTATCTTCAACTTGATGACAACAAGCACATAATAACGGGAACTAGTCTTTCTACAGGTTTACCATATGAGAAGTTCCACTCATTAATCAGTTCTGTAGATGCTAAAGCCGCTAATCCAACAATTGAAGATGCTTAA 957 0.3887 MSFSIFHLISFFLLCSTFLYQSSHAIKKSYIVYLGSHSHGPNPSASDLQSATNSHYNLLGSHLGSHEKAKESIFYSYNKHINGFAAVLEVEEATKLAKHPNVVSLFENKGHELQTTRSWEFLGLENNNGVVPKDSIWEKARYGDGTIIANIDTGVWPESKSFSDDGMGPVPSRWRGICQLDNFHCNRKLIGARFYSKGYESKFGRLNQSFYTARDLLGHGTPTLSIAGVTVVTGGGISGPKFGTVTNLAPWLFSVGASTIVTRFSIRFDRSFVSYLQLDDNKHIITGTSLSTGLPYEKFHSLISSVDAKAANPTIEDA 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01067 318 FunFam Subtilisin-like protease SBT5.3 19 114 - -
Trre5g01067 318 Gene3D - 269 312 - -
Trre5g01067 318 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 228 309 IPR045051 -
Trre5g01067 318 SUPERFAMILY Subtilisin-like 4 228 IPR036852 GO:0004252|GO:0006508
Trre5g01067 318 Pfam Peptidase inhibitor I9 29 110 IPR010259 -
Trre5g01067 318 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 15 114 IPR037045 -
Trre5g01067 318 Gene3D Peptidase S8/S53 domain 228 260 IPR036852 GO:0004252|GO:0006508
Trre5g01067 318 Gene3D Peptidase S8/S53 domain 145 227 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01067 Trre-Chr5 7460074 7462647 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g01067 229 318 Subtilisin-like Serine Gene Family AT2G04160 43.333 5.26e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01067 - - pcin:129318364 349.747