Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01066 ATGAGTAGGACCCCAAGGGCTTACATGAGTAGGGCAAAAACTGAAGTGGGAGTAAAACCAGCTCCAGTAATAGCTTCACTCTCTTCTAGGGGACCTAATCCCATCCAACCAATAATCCTCAAGCCTGATATCAGTGCACCGGGTGTGGACATTCTTTATGCTTACATAGGAGCCATAAGTCCAACTGGTCTAGCATCAGATAATCGTCGGATTCCATATACTATAGGGTCAGGAACTTCTGTGGCATGCCCTCATGTTTCCGCTATTGTTGCACTTCTCAAAACACTTTATCCACATTGGACTCCTGCTGCCTTTAAATCTGCAATCATGACTACAGCAAGAGTTCTAGACAACAATGACACTCCAATTAAAGATCAATCTAAGGAAGATGCAACTCCATTTGGTTATGGAGCAGGACACATTCAACCAGAACTTGCCATGGACCCTGGACTTGTCTATGATCTAAACATTGTTGATTACTTGAACTTCTTATGTTCTCATGGTTACAACCAAACACAGATGAAAATGTTTTCTAGGAATCCCTACACTTGTCCTAAGTCTTACAACTTGTTAGATTTTAACTATCCTTCAATCACTGTGCCTAATCTAAAGAAACACTCCATAGAAATTAGTCGTACAGTTACGAATGTTGGGTCGCCGGGTACATATCATGTGCATGTCAAGGAACCTCATGGGATTTCTGTTTTGGTTGAGCCAAGATCATTAACATTTGATGAAGTTGGTGAAAAGAAGACATTTAAGGTTATCTTCAAGGTAAGAAAATCAACATCATCAGCTTCTTATGTGTTTGGTCACTTGTTGTGGTCTGATGGCAGACACAAAGTTATGAGTCCTCTTGTAGTCAGGCATAACTAG 876 0.4087 MSRTPRAYMSRAKTEVGVKPAPVIASLSSRGPNPIQPIILKPDISAPGVDILYAYIGAISPTGLASDNRRIPYTIGSGTSVACPHVSAIVALLKTLYPHWTPAAFKSAIMTTARVLDNNDTPIKDQSKEDATPFGYGAGHIQPELAMDPGLVYDLNIVDYLNFLCSHGYNQTQMKMFSRNPYTCPKSYNLLDFNYPSITVPNLKKHSIEISRTVTNVGSPGTYHVHVKEPHGISVLVEPRSLTFDEVGEKKTFKVIFKVRKSTSSASYVFGHLLWSDGRHKVMSPLVVRHN 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01066 291 SUPERFAMILY Subtilisin-like 22 212 IPR036852 GO:0004252|GO:0006508
Trre5g01066 291 Gene3D - 164 290 - -
Trre5g01066 291 ProSiteProfiles Serine proteases, subtilase domain profile. 1 147 - -
Trre5g01066 291 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 4 288 IPR045051 -
Trre5g01066 291 Gene3D - 3 16 - -
Trre5g01066 291 FunFam Subtilisin-like protease SBT1.5 164 291 - -
Trre5g01066 291 Pfam Subtilase family 21 139 IPR000209 GO:0006508|GO:0008236
Trre5g01066 291 Gene3D Peptidase S8/S53 domain 17 160 IPR036852 GO:0004252|GO:0006508
Trre5g01066 291 ProSitePatterns Serine proteases, subtilase family, serine active site. 78 88 IPR023828 -
Trre5g01066 291 Pfam Fibronectin type-III domain 192 288 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01066 Trre-Chr5 7445691 7446805 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g01066 1 289 Subtilisin-like Serine Gene Family AT2G04160 54.296 7.61e-108 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01066 - - pcin:129318364 411.379