Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g00978 ATGGAAATGGATGCAAATGCATTTCCACTTTTTATCACCCTAGCAGCTACACTCTCCGCATACTTATTTTGGTTCCACTTACTCGCTCGAAACTTAACCGGCCCAAAAGTTTTCCCATTTTTCGGCAGCCTCCCGGTTCTTTTCATGAACCGAAATCGGGTTCACGATTGGATGACCTCAAACCTAAACCAAACCGGCGGTTCATCAACTTACCAAACATGTATCCTCCCATTCCCTTTCTTAGCTCGCAAACAAGGCTTCTATACCGTCACAAGCCACCCGAAAAACATCGAACACATACTCCGAACCCGGTTTGACAATTACCCTAAAGGACCTACATGGCAAACCGCTTTTCATGATCTTTTAGGACATGGAATATTCAATAGCGATGGTGACACGTGGCTGGTTCAACGTAAAACCGCTGCACTCGAATTCACAACTCGAACCCTTCGACAAGCCATGGCTCGTTGGGTGAACCGAACCATAAAAAACCGGTTATGGTGTATTTTAGATAAAGCCGCTAAAGAAAAAATAACCGTTGATTTACAAGATCTTCTTTTACGGTTAACTTTTGATAACATTTGTGGACTTACTTTCGGTAAAGACCCGGAAACTCTCTCTCCGGATCTACCCGATAACCCGTTTTCTCTTTCTTTTGATAATGCAACTGAAGCTACATTGCAAAGACTACTTTACCCCGGATTCTTATGGAGATTCCAGAAACTTCTAGATCTCGGTGCTGAAAAGAAACTAAAACAGAGTTTGAAAATCGTTGAAACTTACATGAACGACGCCGTTTCTGCTCGCGAGAAATCACCCTCCGATGATCTTTTATCGCGGTTTTTGAAAAAGCGCGACGGAGATGGAAAACCGTTTGACGCCGGAAAATTGATGCACATCGCTTTGAATTTTGTTCTCGCCGGGAGAGATACTTCATCAGTGGCTTTGAGTTGGTTTTTCTGGCTCGTCATGAATCATCCGATTGTGGAGGAGAAGATTTTAACGGAGTTGAAGGAGGTTTTAGCGGAGTCTCGCGGCGGAGATATTAATCGGTGGACGGAAGAGGCGGTGGATTTCGAGGAAGCGGAGAAGCTTGTTTATCTGAAAGCAGCATTGGCTGAGACATTACGATTGTATCCGTCTGTTCCGGAGGATTTTAAATATGCCGTTGACGATGATGTGTTGCCGGACGGTACGGTGGTTCCGGCGGGTTCAACGGTGACGTATTCGATATATTCAGTTGGGAGAATGAAGAGTGTTTGGGGTGAAGATTGCATGGAATTTAAACCGGAAAGGTGGTTATCGGTTCAAGGAAACCGGTTCGAACCGCCAAAAGATGGTTATAAGTTTGTGGCTTTTAATGCTGGACCGAGAACTTGTTTGGGGAAGGATTTAGCTTATCTTCAGATGAAATCTGTTGCTGCTGCTGTGTTAATTCGTTACCGGCTATTACCTGTTCCCGGTCATAAAGTTCAGCAGAAAATGTCTTTAACACTTTTCATGAAGTATGGGTTACGTGTGTTCTTGTATCCACGTCAGCTTCAGAAACCTGACTCTGCTGTGTCTCATTGA 1572 0.4421 MEMDANAFPLFITLAATLSAYLFWFHLLARNLTGPKVFPFFGSLPVLFMNRNRVHDWMTSNLNQTGGSSTYQTCILPFPFLARKQGFYTVTSHPKNIEHILRTRFDNYPKGPTWQTAFHDLLGHGIFNSDGDTWLVQRKTAALEFTTRTLRQAMARWVNRTIKNRLWCILDKAAKEKITVDLQDLLLRLTFDNICGLTFGKDPETLSPDLPDNPFSLSFDNATEATLQRLLYPGFLWRFQKLLDLGAEKKLKQSLKIVETYMNDAVSAREKSPSDDLLSRFLKKRDGDGKPFDAGKLMHIALNFVLAGRDTSSVALSWFFWLVMNHPIVEEKILTELKEVLAESRGGDINRWTEEAVDFEEAEKLVYLKAALAETLRLYPSVPEDFKYAVDDDVLPDGTVVPAGSTVTYSIYSVGRMKSVWGEDCMEFKPERWLSVQGNRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSVAAAVLIRYRLLPVPGHKVQQKMSLTLFMKYGLRVFLYPRQLQKPDSAVSH 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g00978 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
Trre5g00978 523 SUPERFAMILY Cytochrome P450 24 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00978 523 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00978 523 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00978 523 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00978 523 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00978 523 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00978 523 Gene3D Cytochrome P450 28 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00978 523 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00978 523 PRINTS P450 superfamily signature 460 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00978 523 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00978 523 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00978 523 FunFam Cytochrome P450 26 515 - -
Trre5g00978 523 PANTHER CYTOCHROME P450 26 506 - -
Trre5g00978 523 CDD CYP86A 72 505 - -
Trre5g00978 523 Pfam Cytochrome P450 88 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g00978 Trre-Chr5 6799395 6800966 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g00978 15 512 Cytochrome P450 AT5G58860 75.301 0.0 795
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g00978 K15401 - gmx:100787559 859.366