Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g00951 ATGTGCTCATATTCAATAGCGTTGGTCATTTTGCAGCTGCAGTCAACAGCCGAAAATAGGTATAACCATAACATGAAAAGGGAGAGACATCAGAGAAATTTATTATTGGATAGTTCCTGTCCTATTGCCATGTCTCCAACTGAAAAATACGACGTGTTTATCAGTTTCAGAGGAGAGGATACTCGTGACAACTTCCTCAGTCATCTGACTGCAGAATTATGCAGGAAAAATATCAATGCATTCGTTGATAACAGGATGGACAAAGGCGAAGAGATTTCATCGACACTGTACGCAAAAATAGAACAATCAATGATTTATTTAGTCATTTTGTCTGAGAACTATGCTTCTTCCGCATGGTGTTTAGATGAACTCACAAAGATACTCGAGTGCAAACAAAAATATGGAAGGGATGTGATACCGGTATTTTACAAGGTGGATCCGTCAAATGTTAGAAATCAGACAAAGAGTTACGCGAAAGCTTTCATTAAGCATCAACGACGATATAGGAACAAAGTGGATACATGGAAGGCTGCTCTTACTCAAGCAGCTAAACTTTCAGGATGGGATTCAAAAGAAATCAGTCCAGAACATAAACTCGTTACCGACATTGTGGAAGAAATTTTGAGGAAAAAAATGAACCGCCATTGTTTAGTAAGCGATTGTGAAGGAATGATCGGAATGGACAATCATATTGAACAAATCAAATCATTGTTGCACCTTGAATCAGAGCCAGAGGCTACTCGGATCGTAGGAATTTGGGGTATGGCAGGAATAGGTAAAACAGCAATTGCTCAAGCAATATATCACAGACTTGCACCTCAATTCAACTCCAGCAGCATGATTTTAGATGTTGAAGAAGAAACAAAAAGATTTGGACTGCCCAATATAGAAAATCAATATATATCAGAGCTTCTAGAGGAAGACCGACTTTCCTCTAGATTGCGGTGCTCGTATGATCAAAGGCTGAAACAAACAAAGGTTCTCCTTGTTCTTGATGATGTGAACACTTCAAATTTAACTATAGAGCCTTCTAACTTTGGCCATGGTAGTAAAATCATTTTGACTAGTAGAGACAAGAAAGTGCTTCGGAATGCTAAAGCAGATGAAATATACATAGTCAAGGAGATGTGTTTTCAAGATTCACTACGGCTCTTCAGCTTAAATGCATTTAAACAAAACTATCCGATAAATAATGATTATGAGGACTTGTCAAAAAAGCTGGTATTAAACTATGCTAAAGGGGTTCCGCTAGCTCTAAAGGAGTTGGGCAAATCGCTTCATGGTGAACCAGTGGATGCATGGGAAAGTCAGTTGCAAAAGTTGGAAAAATTTCCCAATAAGAAGATTTTTGACAGATTTAAATCAAGTTATTATGATGAACTTGACCCCCTAGAGAAAGATATTTTTCTTGATATAGCTTGCTTCTATACAGGACATTTGGTATATGATGTAGCACAACAAACACTACATAGTTATGGTTTCTTTCCTATCACTGCAATGAATGTTCTTATAGATAGGGGCATTATATCTATTTCGGAAGGTAGAATTGTGATGCATTATCTAATACAGAAAACCGGACAAGAAATTGTTCGTCAGCAGTCTGACGATGATCCTAGAAATCAGACTCGATTGTGGAATCCTGAAGAAATTTATCATGTTTTAATAAACAAGGGGTCAAATGCAATCCGGTGTATATTCCTGGACATCTGCAAAATATATAAGGTTCAACTACAGGCTGACACTTTCCAAAAGATGAATAATCTTAAAATACTTCAGTTTTATAAGTCTTTTCCACAAGGCGACTCGAATGTGATCTTGCGAGAATCTATTAAAAACCTTTCTCATACATTAACATTTCTTCGTTGGGATGGCTTTCCTCAAAAACATCTGCCACTGGAGTTTTGTCCAAAAAACCTCGTCAAACTTGATATGCGTGAAAGCGATCTTGAGAAACTTTGGGAGGGAGATGATCAGCATTTACCAAATTTGAAGAGACTTGATCTTAGTCGTTCTAAGAAGCTTACTAAAGTGCCAGACCTAGCACTTTCTCCAAATATTGAAAAAATCATTCTAAGTGGTTGTGAAAGCTTGACTGAAGTTTCGTCCTCGAGTTTCCTCAGCGAGCTCAACTGTTTGTGTTTAAATGGTTGTGTTCAGCTCAAGAGTTTGCATCTTCCAAGGAATGTTCTGTCGCGAAGTCCTGGATTAGTTGTTCTTTATGATTGTGCCAAGCTTGAACTATCTTCAATCAGCTCTAAAACTCATGTTTTTTTCCATGGGGGCTGTACTCATCTTGTTCGTGTTGAAAATTTATATTTTCTATTCTAA 2328 0.3754 MCSYSIALVILQLQSTAENRYNHNMKRERHQRNLLLDSSCPIAMSPTEKYDVFISFRGEDTRDNFLSHLTAELCRKNINAFVDNRMDKGEEISSTLYAKIEQSMIYLVILSENYASSAWCLDELTKILECKQKYGRDVIPVFYKVDPSNVRNQTKSYAKAFIKHQRRYRNKVDTWKAALTQAAKLSGWDSKEISPEHKLVTDIVEEILRKKMNRHCLVSDCEGMIGMDNHIEQIKSLLHLESEPEATRIVGIWGMAGIGKTAIAQAIYHRLAPQFNSSSMILDVEEETKRFGLPNIENQYISELLEEDRLSSRLRCSYDQRLKQTKVLLVLDDVNTSNLTIEPSNFGHGSKIILTSRDKKVLRNAKADEIYIVKEMCFQDSLRLFSLNAFKQNYPINNDYEDLSKKLVLNYAKGVPLALKELGKSLHGEPVDAWESQLQKLEKFPNKKIFDRFKSSYYDELDPLEKDIFLDIACFYTGHLVYDVAQQTLHSYGFFPITAMNVLIDRGIISISEGRIVMHYLIQKTGQEIVRQQSDDDPRNQTRLWNPEEIYHVLINKGSNAIRCIFLDICKIYKVQLQADTFQKMNNLKILQFYKSFPQGDSNVILRESIKNLSHTLTFLRWDGFPQKHLPLEFCPKNLVKLDMRESDLEKLWEGDDQHLPNLKRLDLSRSKKLTKVPDLALSPNIEKIILSGCESLTEVSSSSFLSELNCLCLNGCVQLKSLHLPRNVLSRSPGLVVLYDCAKLELSSISSKTHVFFHGGCTHLVRVENLYFLF 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g00951 775 Gene3D - 208 374 IPR027417 -
Trre5g00951 775 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 50 728 IPR044974 GO:0006952
Trre5g00951 775 Gene3D - 378 462 IPR042197 -
Trre5g00951 775 SUPERFAMILY Toll/Interleukin receptor TIR domain 45 188 IPR035897 -
Trre5g00951 775 Pfam TIR domain 49 213 IPR000157 GO:0007165
Trre5g00951 775 SMART AAA_5 246 377 IPR003593 GO:0016887
Trre5g00951 775 FunFam Disease resistance protein (TIR-NBS-LRR class) 46 213 - -
Trre5g00951 775 SUPERFAMILY "Winged helix" DNA-binding domain 458 554 IPR036390 -
Trre5g00951 775 ProSiteProfiles TIR domain profile. 48 207 IPR000157 GO:0007165
Trre5g00951 775 Gene3D Ribonuclease Inhibitor 549 773 IPR032675 -
Trre5g00951 775 Pfam Leucine Rich Repeat 638 655 IPR011713 -
Trre5g00951 775 SUPERFAMILY L domain-like 553 765 - -
Trre5g00951 775 PRINTS Disease resistance protein signature 658 674 - -
Trre5g00951 775 PRINTS Disease resistance protein signature 412 426 - -
Trre5g00951 775 PRINTS Disease resistance protein signature 249 264 - -
Trre5g00951 775 PRINTS Disease resistance protein signature 321 335 - -
Trre5g00951 775 Pfam NB-ARC domain 228 447 IPR002182 GO:0043531
Trre5g00951 775 SMART till_3 49 185 IPR000157 GO:0007165
Trre5g00951 775 Gene3D - 47 207 IPR035897 -
Trre5g00951 775 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 211 472 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g00951 Trre-Chr5 6586819 6589617 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g00951 9 761 WRKY Transcription Factor Family AT4G12020 31.307 4.21e-86 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g00951 - - tpra:123916708 1283.09