Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g00944 ATGAAATACTCAACTCCAACACAAACACCAACTTCTTCAAATGTATCTCCATCAATTTCATCCAACACACCAATGTGTAGCTCCAAAACCACCGCAACAGGATGTCTCACAGCCATCATGCGCAAGATTCTTTGCTCAGGAAACCTTCCAAAAGATTCATCAAATCAAATGACAGAATTTGATTCAACAAACTCTGTTCTGAGTTACAAAGATCATAACTTCAATATTTCTGAGGACAATGCTATGGCTGCTGCTGCTGCTGTTACTCCTCCTCCTCCTATAGTTGCAAGGTTGATGGGTTTAGAATCAATGGGAGAAGTACCATTTGCATCAAAACTAGGTTCACTTTCGCGAAGCAAATCGATGAACTCTATGGATTATTTAGGAGAGAGCAATGGAAAAATTCAGAGTCTTCATCATAAGAGAGTTAATTCAACATTGTCATTTAGAGAGCCTCCAACTTTTCAGTTAACTGAAAATGAAAGCTTTTTTGTGCTTAACTTTGAAAATGAAGTTGACAGTGTTAAAGGGTTGAAATTGAAATCCAAATTCAATGGGAGAAAAAAGCAAATGGGCTGTTCTGAATTGAAGCAGAAAGATGAAAAAAAGATAGTTGATTTGAAGGAGAAGAAAAACAAGAGAGAAAATGTTTATGATGAGAAAGTTTTGATTGAGAAAGGAAAAATGAGCAAAAGGGTGTCTAATAAACTTCAAGAAATCACCAACACTTCATATAAGTTCAAGAGTTTATCTGAAAGGAAGTGTTTTGATTCAGAAGCAGTTGAATTGTTGAAGCCAAATAGCTACAAGGAAGTTGTGATTGGTGAAAAGAAGAAGAGGAGAATAAGGAGGAAGAGAAGAACAAATTTTTATGCAGAAAAGAAGATTGAAACTGAATGCAAATCAGATGAATCAAGTCCTGTTTCTGTCCTCGAATTCGAGCGCAAGTCTTGTGGAACAGGAATAGATTCTATTGCAGCTGGTTTAAGTTCAAGAAGAAAGTTGACACCGGAGCTTGAAAATAACAAGAACATTCTTATGCGTTCCGATGATAATTTGATGATTGATGAGAAGAAGGATAAGGCAATTGAAGGATCAAAGAAGAAAGAGAAGCATAATTACAAAGAGTATATAGATATTTGGGGTGAAGCATGCAGGCTAGTTGAAGCTGAATTGGTTGGTTCAAAAAATCAAGTTCATGCATGGATGAATCAAGAAAGTGATTTAGGAAGTGTATGTGCTGATTTTGAGTCAGAAATTTTTGATCAATTGTTGAATGAGGTGATAAGTCAACTTGTTGAGTAA 1305 0.3586 MKYSTPTQTPTSSNVSPSISSNTPMCSSKTTATGCLTAIMRKILCSGNLPKDSSNQMTEFDSTNSVLSYKDHNFNISEDNAMAAAAAVTPPPPIVARLMGLESMGEVPFASKLGSLSRSKSMNSMDYLGESNGKIQSLHHKRVNSTLSFREPPTFQLTENESFFVLNFENEVDSVKGLKLKSKFNGRKKQMGCSELKQKDEKKIVDLKEKKNKRENVYDEKVLIEKGKMSKRVSNKLQEITNTSYKFKSLSERKCFDSEAVELLKPNSYKEVVIGEKKKRRIRRKRRTNFYAEKKIETECKSDESSPVSVLEFERKSCGTGIDSIAAGLSSRRKLTPELENNKNILMRSDDNLMIDEKKDKAIEGSKKKEKHNYKEYIDIWGEACRLVEAELVGSKNQVHAWMNQESDLGSVCADFESEIFDQLLNEVISQLVE 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g00944 434 PANTHER OS05G0128300 PROTEIN 27 434 - -
Trre5g00944 434 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g00944 Trre-Chr5 6513891 6515491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g00944 28 171 TRM (TON1 Recruiting Motif) Superfamily AT5G58630 35.417 9.00e-12 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g00944 - - mtr:25490904 571.237