Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g00915 ATGTCAAAGGCAGTTTGTGTCACCGGAGCCAGCGGAGCCATTGGTTCATGGGTGGTTCGCCTCCTCCTCCAACGCGGCTACATTGTCCACGCCACCATCCAAGATCTCGAGGATGAGAACGAGACAAAACATTTGGAAGCAATGGAAGGAGCAAAGGGTCATCTCAAATTTTTTGAAATGGATCTTCTTAACAGCGACTCTATTGCGGCCGCCGTGAAAGGTTGTGCCGGAGTTATACATCTTGCATGTCCTAACATCATTGGTGAAGTCAAAGACCCCGAGAAGCAAATTTTGGAACCGGCAATTCAAGGAACGGTTAATGTGTTGAAGGTGGCAAAGGAAGCAGGGGTGGAGCGTGTGGTGGCGACATCGTCGATCTCCGCCATCATACCGAGTCCTAATTGGCCAGCTGATAAGATTAAGGGAGAAGATTGTTGGACAGACCTTGATTATTGCAAGGAAAAGAAGTTATACTACCCCATTGCAAAGACACTAGCAGAAAAAGCTGGTTGGGAATTTGCTAAAGAGACCGGTTTTGATGTTGTTATGATTAACCCTGGTACTGCTTTGGGCCCTTTGATTCCACCAAGAATTAATTCTAGCATGGCTGTTCTTGCTGGTGTTCTCAAAGGTGACACAGAGACATATGAGGACTTCTTCATGGGAATGGCCCATTTTAAAGACATAGCTTTGGCACATATTTTGGGTTTTGAGCAAAAGAAAGCAGCTGGGAGGCATTTGTGTGTGGAAGCTATTCGTCACTATAGTGATTTTGTCAATTTGGTTGCAGATTTATACCCTGAATATAATGTTGCAAAGTTACCAACGGATAAACAACCTGGATTGTTGAGAGCAAAGAATGCATCAAAGAAGCTGATTGAATTAGGTCTAGAGTTCACTCCAGCTGAACAAATTATCAAGGATGCAGTTGAGTGTTTGAAGAGCAGAGGTTTAGTTTAA 960 0.4417 MSKAVCVTGASGAIGSWVVRLLLQRGYIVHATIQDLEDENETKHLEAMEGAKGHLKFFEMDLLNSDSIAAAVKGCAGVIHLACPNIIGEVKDPEKQILEPAIQGTVNVLKVAKEAGVERVVATSSISAIIPSPNWPADKIKGEDCWTDLDYCKEKKLYYPIAKTLAEKAGWEFAKETGFDVVMINPGTALGPLIPPRINSSMAVLAGVLKGDTETYEDFFMGMAHFKDIALAHILGFEQKKAAGRHLCVEAIRHYSDFVNLVADLYPEYNVAKLPTDKQPGLLRAKNASKKLIELGLEFTPAEQIIKDAVECLKSRGLV 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g00915 319 FunFam Cinnamoyl-CoA reductase 1 1 319 - -
Trre5g00915 319 CDD FR_SDR_e 5 297 - -
Trre5g00915 319 Gene3D - 1 319 - -
Trre5g00915 319 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 4 310 - -
Trre5g00915 319 Pfam NAD dependent epimerase/dehydratase family 5 197 IPR001509 -
Trre5g00915 319 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 313 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g00915 Trre-Chr5 6290957 6294984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g00915 3 319 Monolignol Biosynthesis Gene Families AT5G58490 64.984 6.18e-160 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g00915 - - gmx:100806281 544.658