Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g00905 ATGAACAGTGCCACCATTGATACTATCGAAGAAAACGGACATGGAAGCGATTCAGACGCGAATTCCGAGGATGCATCGGAATACTACCAACCGATATCAGCGGTAGACGACGACGGAAGCTCAGACGGAGAGAACGGAATTGAATTCCAGCAACTTCCGAACGGGTACAGTGCACACGGAGGAGCGGAGAACGGGATATCGATGCTGGATCTGAACGACGGCGTAGAGCAGAAGAGTAGTGACGAGGAGGAAGAAGAGGAAAGGAGCAGGGAAGAATTTGAAAATGAGATTCGGAGAGCATTGAGGGAAGATGAGAATCGGAGGAACGCGCCGTTGCCGGCGGAGAATGCGACGAGAGTGATGGAGGCTATGCGTGGTATTTCGTTTGTTGGAGAAGTTCCTCCATGGGCTTCAGAAGTTCCTGTTGATCGTTGGATTGATCAAATTCGTAGACGGAGACAATCACCAAATACTTAA 477 0.4969 MNSATIDTIEENGHGSDSDANSEDASEYYQPISAVDDDGSSDGENGIEFQQLPNGYSAHGGAENGISMLDLNDGVEQKSSDEEEEEERSREEFENEIRRALREDENRRNAPLPAENATRVMEAMRGISFVGEVPPWASEVPVDRWIDQIRRRRQSPNT 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g00905 158 PANTHER BNAA08G28800D PROTEIN 3 157 - -
Trre5g00905 158 MobiDBLite consensus disorder prediction 1 116 - -
Trre5g00905 158 Pfam Male enhanced antigen 1 (MEA1) 27 154 - -
Trre5g00905 158 Coils Coil 72 110 - -
Trre5g00905 158 MobiDBLite consensus disorder prediction 91 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g00905 Trre-Chr5 6177973 6178547 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g00905 10 155 Chloroplast and Mitochondria Gene Families AT1G07020 49.669 3.34e-33 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g00905 - - lang:109344979 199.904