Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g00902 ATGGTGAAACATAATCATGGTTCAACAATTTCTTCTGTTGCCATTTTGTGTCAAGAACAAACAAATTTTCACCCTGATGGCATCTTTTATGGTGACAATCCCTTAAGTCACTCCTTCTCAATACTTATGTTCCACCTCATTCTTATTACCACCATCACACGTATTATTCGTTTTCTTCTTAAGCCTCTCAAACAACCTATAATCATTTCTCAAATAATTGGTGGTGTCATTGTTGGACCATCCTTTCTAGGACGAAGCAAATGGTATCATCGACACGTAAAACCCGAGGCGGCGCAATTCCTAATGAACAACCTAGGAATTATGGGGTTCATGTTCTTTGTTTTTGTCTATGGTGTGAAAATGGATCCAAGCTTATTGAAAAAATCAGGAAAAATGCATGTATCAATAGCATTAACAAGCATAACAATTCCAACATTATTAGTATATGTTGTAGCACTATCTTTAAGAAAACATATGGACAAAGATTTAAGTGCAATTTCATCAATAGGAGTAATAGCAGGATACTTAGGAATAACAGCATTCCCTGTTCTGTATCATGTCCTAAAAGAGCTTAACCTTCTAAACTCAGACGTGGGTCGATTTGCGTTATCGACCGCATTAATCGGAGACGCAATTGGAATGGGTAGCATTTTAGCATTTGAAGCAGAAAAACAAGGACAAACAAGAACAGAGAATGCTTTTTGGTATATGCTTTCTGCTATAGTTTTAGCAACAGTGTTATTATGTTGTGTTAGGCCAGCAATGATATGGATTAATAATAAAACACCAGAAGGACAACCAGTGGATCAATCTTTTATTGTTGCTATACTTTTAGGGATTTTTGTGATGGGCTTTTTAACTGATATGTTTGGTATAGCAATTGTTAATGGGCCTTTGTGGTTGGGCTTAGTTGTTCCTGATGGGCCTGGTTTAGGAGCAACATTGGTGCATAGGAGTAAGACTTTTATGAATGAGTTTCTTATGCCATTTTCTTTCATTTTGGTTGGACAATATGTTGATTTTTTTGAATTGGGAGGTTCTGAATGGAAAAGCTTGAAACCTTTGTTTTTCATGGTTTTGACTGGTTACTTGGCCAAATTCTTTGTTACTTGGATGGTTGCAATGTATTGGCGTATGCCATTTAGAGATGGAATAACTTTTAGCCTCATTATGAGCTTAAGAGGACAAGTTGAACTTATCTTGTTTGTGCATTTGATGGACAAAAAGGTGATCAATGTACCAGGCTTCACATTATTGGTACTAATGACAATAATATTGACAGCAACTTTCACTCCTCTAGTCTCCATTATATATGATCCAACAAGACCATACATATTGAACCAAAGGAGGAACATTCAACACAATCCACAAGGTGTAGAACTTAGAATAATTTTATGCATTTTCGACACCGAAAATACAAATGGATTACTCCATCTACTTGATGTTACCAACCCAACCTCAAGCACCCCAATTTCAGTTTCTTCTCTTAGACTATTCGAGCTTACGGGCCGCGCTAACCCTTTATTCATCGATCACGCGAAACAAGAAGTTCCTCCAATATATCAATCGACACAGACTATAAATGCACTTGGAAGTTTCCAACATATCAGAAGAGAGTTTATGAAAATTCAATTTTTCACTGCCGTGGCTCCCAAGCAATCAATGTTCCAAAACATCTGTGAACTCGCGCTCGAACAAGAAGCGTCGCTAATCATCTTGCCTTTCATTAATAGAGGATTTTATGACAATGGATTGAATGGAACAAGAAGAACGGCGAATTCACAAGTCTTGAATCATGCACCTTGTTCTATTGCAATTCTTGTTGACAAAGGTACTCCTGATATTACCGCGGTAGGAAATTCAACGCGGCATTCTAGAAATAGGTTTGCCGTGTTGTTTCTTGGAGGTGCTGATGCTAGAGAAGCACTTGTTTATGCGGATAGGATGGTTGCGAACGAAGATGTGTCACTTACCGTTATACGGTTTCTTTCTTACAATAATGTAGGGGATAATGAAAGGGAGAAGAAGCTTGATGATGGAATTGTGACATGGTTTTGGGTGAAGAATGAGATGAATAGTAGAGTTGTGTATAGAGAGGTTGTGGTTAGGAATGGTGAAGAAACAATTGGAGCAATTAATGATATGAATGATGGTGGTTATGATCTTTTGATAGTTGGAAGGAAACATGGGATTAATCCTGCTATTCTTACAGGATTATCTGAATGGAGTGAAAGTGATGAGTTAGGACTTATTGGTGATTATGTTAGTTCAAAAGATTTTAATGGCTCAGCTTCTGTTTTAGTGGTACAACAACAAGTTCTAAGAGGTTAA 2331 0.3732 MVKHNHGSTISSVAILCQEQTNFHPDGIFYGDNPLSHSFSILMFHLILITTITRIIRFLLKPLKQPIIISQIIGGVIVGPSFLGRSKWYHRHVKPEAAQFLMNNLGIMGFMFFVFVYGVKMDPSLLKKSGKMHVSIALTSITIPTLLVYVVALSLRKHMDKDLSAISSIGVIAGYLGITAFPVLYHVLKELNLLNSDVGRFALSTALIGDAIGMGSILAFEAEKQGQTRTENAFWYMLSAIVLATVLLCCVRPAMIWINNKTPEGQPVDQSFIVAILLGIFVMGFLTDMFGIAIVNGPLWLGLVVPDGPGLGATLVHRSKTFMNEFLMPFSFILVGQYVDFFELGGSEWKSLKPLFFMVLTGYLAKFFVTWMVAMYWRMPFRDGITFSLIMSLRGQVELILFVHLMDKKVINVPGFTLLVLMTIILTATFTPLVSIIYDPTRPYILNQRRNIQHNPQGVELRIILCIFDTENTNGLLHLLDVTNPTSSTPISVSSLRLFELTGRANPLFIDHAKQEVPPIYQSTQTINALGSFQHIRREFMKIQFFTAVAPKQSMFQNICELALEQEASLIILPFINRGFYDNGLNGTRRTANSQVLNHAPCSIAILVDKGTPDITAVGNSTRHSRNRFAVLFLGGADAREALVYADRMVANEDVSLTVIRFLSYNNVGDNEREKKLDDGIVTWFWVKNEMNSRVVYREVVVRNGEETIGAINDMNDGGYDLLIVGRKHGINPAILTGLSEWSESDELGLIGDYVSSKDFNGSASVLVVQQQVLRG 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g00902 776 Pfam Sodium/hydrogen exchanger family 47 434 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Trre5g00902 776 Gene3D - 472 742 - -
Trre5g00902 776 Gene3D - 40 442 IPR038770 -
Trre5g00902 776 FunFam Cation/H(+) antiporter 24 40 445 - -
Trre5g00902 776 PANTHER CATION/H + ANTIPORTER 17 772 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g00902 Trre-Chr5 6154172 6157392 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g00902 16 773 Antiporter Super Family AT5G58460 44.162 0.0 690
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g00902 K26731 - gmx:100783296 990.334