Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g00899 ATGGCTGAAAACGGCGAAGAGAAATTACTCGCCGTGGCGCGTCACATAGCAAAAACGCTAGGCCAAACAAACAACAACATGGCCGATGATATTCTTCAAATATTCTCAAATTTCGACGGTAGATTCTCTAAGGAGAAACTTTCTGATGAAGGTGTAGGGAATGATACCGTACGCTGCGCTGCACTTGAACAAACTATTAATTCTCTCGACCGTCAGATTTCGGATCATCTTTCGTCGGAAAATTCTGTTTGTTGTAACTCCACCGCGTTTCTCTCCGTCGTTGACGAGCTCGTTTCGACGATTGAAGATTGGAGTCCTCTCTCCGATGATAAGGTCGTCGGCGCGTGTTTACAACGCGCTGATGATATTCTTCAACAGGCTATGTTTCGTGCGGAGGAAGAGTTTCGGTCACTTATGGAAATCGGTAGTGAGTCGTTTGACGTGACTCGGAACAGCGACGAGTTGACTCAGAACGGTAGTTCGTTGTATGATTCGAATGGTGAGGAAGAAGATGAAGAAGAAATTGACGGTGACGAGGATGTGATTCCTGTGGCGAAGGCGGTTGTTGATTATGATGTTGTGATTGATGCGTTACCTCCGGCGACGGTTAACGATCTCCGGGAAATTGCGAAACGGATGATTGCGGCGGGGTTTGGGAAGGAGTGCTCGCATGTTTACGGTGGTTGTAGGAGGGAGTTTTTGGAGGAGAGTTTGTCGAGGTTAGGGTTACAGAAATTGAGCATTTCGGAGGTTCACAAGATGCCATGGCAAGAGCTTGAAGACGAGATTGAACGATGGATTAAGGCTTTGAATGTCGCTCTCAAAATCCTCTTCCCAAGCGAACGGCGTCTATGCGATCGTGTCTTCTCCGGTTTATCTTCGTCATCGGCAGCCGCTGATCTTTCCTTCATGGAAGTCTGTCGTGGATCAGCAATTCAGTTGCTGAATTTCGCCGATGCTGTAGCAATAGGTAGTCGCTCGCCGGAACGGTTGTTTAGAGTCCTGGATGTGTTTGAGACTATGCGTGACCTAATTCCCGAATTCGAATCGTTGTTCTCTGATCAGTATTGCTCGTTCCTTGTTAACGAAGCAATCACGATTTGGAAGAGGTTAGGAGAAGCTATTAGAGGAATTTTCATTGAATTAGAGAATCTGATTAGTCGTGATCCGGTGAAGGCGGTTGTTCCTGGCGGAGGTCTTCATCCAATCACTCGTTATGTGATGAACTATCTCCGCGCTGTGTGTCGGTCGCACCAAACCCTAGAACTTGTTTTTCAAGACAATGCACTTTCATTGAAGGATTACCCTAAGCATGATGATAGGTTACAATCAAATTCTTCATTTGCTGTTCAAATATCATGGATTATGGACTTGTTAGAACGAAATTTGGAAGCAAAGTCTAAAATTTACAAAGACCCTGCTTTGTGCTCTGTTTTTATGATGAATAATGGGAGATACATTGTTCAGAAGACTAAAGACAGTGAATTAGGGACACTTTTGGGCGATGATTGGATCAGAAAGCATAGTGCCAAAATTCGGCAATGCCATATGAACTATCAAAGAAGCTCATGGAACAAGTTGTTTGGGTTTCTGAAGGTGGATACAATGGCTGCAAAACCCATGAAGGAGAAACTAAAGATGTTCAATCTGCATTTCGAAGAAATATGTAGGGTTCAATCTCAGTGGTTTGTCTTTGATGAGCAACTCAGGGAAGAATTAAGGATCTCCATCGAAAAGCTTTTGTTGCCTGCATATGGAAGCTTTATTGGAAGGTTTCGAATTGTTCCAGAGCTTGCTAAGAATAGTGATAAGTATATCAAGTTTGGTATAGAAGACGTTGAAGCTCGGCTTACCACTTTGTTTCAGGGAAGCGGTGGATCAAATGGTGGCCGAAAATGA 1899 0.4418 MAENGEEKLLAVARHIAKTLGQTNNNMADDILQIFSNFDGRFSKEKLSDEGVGNDTVRCAALEQTINSLDRQISDHLSSENSVCCNSTAFLSVVDELVSTIEDWSPLSDDKVVGACLQRADDILQQAMFRAEEEFRSLMEIGSESFDVTRNSDELTQNGSSLYDSNGEEEDEEEIDGDEDVIPVAKAVVDYDVVIDALPPATVNDLREIAKRMIAAGFGKECSHVYGGCRREFLEESLSRLGLQKLSISEVHKMPWQELEDEIERWIKALNVALKILFPSERRLCDRVFSGLSSSSAAADLSFMEVCRGSAIQLLNFADAVAIGSRSPERLFRVLDVFETMRDLIPEFESLFSDQYCSFLVNEAITIWKRLGEAIRGIFIELENLISRDPVKAVVPGGGLHPITRYVMNYLRAVCRSHQTLELVFQDNALSLKDYPKHDDRLQSNSSFAVQISWIMDLLERNLEAKSKIYKDPALCSVFMMNNGRYIVQKTKDSELGTLLGDDWIRKHSAKIRQCHMNYQRSSWNKLFGFLKVDTMAAKPMKEKLKMFNLHFEEICRVQSQWFVFDEQLREELRISIEKLLLPAYGSFIGRFRIVPELAKNSDKYIKFGIEDVEARLTTLFQGSGGSNGGRK 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g00899 632 MobiDBLite consensus disorder prediction 150 164 - -
Trre5g00899 632 Pfam Exo70 exocyst complex subunit 264 618 IPR046364 GO:0000145|GO:0005546|GO:0006887
Trre5g00899 632 MobiDBLite consensus disorder prediction 150 176 - -
Trre5g00899 632 Gene3D Exocyst complex component Exo70 71 629 - -
Trre5g00899 632 PANTHER EXOCYST COMPLEX PROTEIN EXO70 61 623 IPR004140 GO:0000145|GO:0006887
Trre5g00899 632 SUPERFAMILY Cullin repeat-like 86 621 IPR016159 -
Trre5g00899 632 FunFam Exocyst subunit Exo70 family protein 74 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g00899 Trre-Chr5 6129570 6131468 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g00899 1 632 EXO70 exocyst subunit family AT5G58430 67.083 0.0 847
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g00899 K07195 - csav:115721257 869.766