Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g00896 ATGGAGTCAGACCAAAACAATTTCATTAGCAACAATTCTATGTCTGATGGAACAGATACACAGTTTGGAGGATCATTCATATGTCATACAATTAACCAAATCAACTCCAAGGGATTTTGGTTAGGAGAAAACCCACTTGCTTTTTCTGTCCCTCTTTTCTTGATCCAACTTTTTCTTATGTTCATTTTCACACGCTTCAGTTTCCTTATTCTCAAGCCTTTTGGTCAACTTTCTTTTGTTTCTCAGATTCTTGGTGGTGTGACACTTGGTCCTTCAATTCTTGGTCACAACTCATCATTTGCCAACAATTTTTTCCCAATAACAGGACGAAATATACTCGACACAGTAGCATTTTTTGGTTATATGTTATTCATCTTCATACTTGGAGTAAAGATAGATCCAACCATCATTTTCCGATCAGGTAAAAGGACGTTCGCCATTGGAATTTTAAGCTTCTTTGTTCCTTACACTCTCGGCGGAATTGTAGCTTTAATCCTCAGCCACTTTGCATCATTGGATAAGGATGTTTTGAAAGTACTTCCTATTGTGGTAGAAGTTCAATGTATCACAGCCTTTCCAGTAATTTCTTGCTTTCTTGCTGAACTTCAGATCCTCAATTCAGAGATTGGACGGTTGGCTTCGTCTTCTTCGCTAGTATGCGACGTTTGTTTCTGTATAGTTTCAACAATGAAGTTTGCTGCAAATCTATCATCAACAAAGTCAATAGGAGTAACCATTGGATCGCTCTTTTCAACCGCTGTTCTTATTTTATTCATATTTTTTGTTGTTCATCCAGCTGCATTATATGCAATTCAACGCACACCAGAGGGAAAACCAGTTCAAGAAATTTACATTTGTGGAACTCTTATAACACTAATGTTTTGTGGATTCATCGGTGAAGTTATCGGTATAGATGCAATCGTTATATCATTTATGGTAGGGTTGGCTATACCAGATGGTCCTCCTTTAGGTGCAGCATTAGTAGATAAGCTTGAGTGTTTTGTTTCAGTTGTGCTTTTACCGTTACTTTTTGCGGTCGTTGGATTGAGGACGGATGTTTTTGCTATACAGAAGATGAAGAATTTGTGGATAGTTCAGTTGATTATTTGCATTGCATTTATTGGTAAGATTATTGGGGCTTTGTTGCCTCTACTTTTCTGTAGGATGCCCTTTAGAGATGCTCTTTCTCTTGGTCTTATAATGAACTGCAAAGGCACTGTTGAATTGGCCTTGTTGATTGATTTGAGATTAAGAAATGTTCTGAATGATGAACTGTTTGCAATTATGATTCTTACTTTGGTGCTTGTAACCGGCATTGTATCGCCTGTTGTGAAAGCTCTATATGATCCTTCTAGAAGGTTCCTTGCTTACAAAAGGAGGACAATATTGCATCACCAAAGCAATGAAGAATTGCGCATACTAGCTTGCATTCACAAACAAGATAATGTGTTGGCTATTTTTAACCTACTTTCTGCATCGAATCCAACCGAAAAAAATCGCATTGATTTAGTTGTACTACAACTTGTTAAGCTTGTAGGGAGAGCTTCATCGGTACTTGTTGCGCACATACCGCGCGAAAAGCCAAGCGATAAAATCTTCAACGCGTTCAGCAAATTTGAAGATGCATATAGAGGAAAGGTATCACTACATTGCTACAAAGGTATCTCACCCTATGCTACTATGCACAATGATGTGTGCTACTTAGCACTTGAAAAAAGAATAACTTTCATAATCATACCTTTCCATAAACAATGGATAATCGGAGGTATGGCCGAGTCATCTTTTGCATTCAAGCAACTCAACAAGAATGTTCTCGAGAAAGCTCCTTGCTCGGTCGGTGTCCTCATTGATCGTGGCAACCAGAAGAAATTTTGGTGCGGATATATGAACGAATCGACATATCTAGTTGCCGTTTTTTTCTTTGGAGGTGCAGACGATAGAGAAGTGCTCGCGTACGCGAAACGTATGTTGGATCAACCTAATGTAAATATTACACTCTTTCAATTTACGTCTTCGAAAGATATTGTTGGTGGTACAGAAAGAAGCAAAAAGCTTGATACTCAAATATTAAGTGAGTTTAGGCTAAGTGCTTTTAGGAATGATAGAGTTTCTTATAAAGAAGAAGTTGTAATGAATGGAAGAGATGTTCTTTCAGTTATTGAAGAAATGGAGAGTTTTTATGATCTTGTTATGGTTGGAAGGAGGCATGAAGATTCACAGTTAATGGCTGAACTTACAAAATGGAAGCATGGAGAGTTGGGAAGTGTAGGAGAGATTCTTGCTTCTTTAAATATTGGAGATAAAACTTCAATTTTGGTTGTGCAACAACAAACTAGATTTTGGGGGTCACGTGATCCAGAGGAATCTACACATTTGAGAAGAGTAAATATATAG 2394 0.3772 MESDQNNFISNNSMSDGTDTQFGGSFICHTINQINSKGFWLGENPLAFSVPLFLIQLFLMFIFTRFSFLILKPFGQLSFVSQILGGVTLGPSILGHNSSFANNFFPITGRNILDTVAFFGYMLFIFILGVKIDPTIIFRSGKRTFAIGILSFFVPYTLGGIVALILSHFASLDKDVLKVLPIVVEVQCITAFPVISCFLAELQILNSEIGRLASSSSLVCDVCFCIVSTMKFAANLSSTKSIGVTIGSLFSTAVLILFIFFVVHPAALYAIQRTPEGKPVQEIYICGTLITLMFCGFIGEVIGIDAIVISFMVGLAIPDGPPLGAALVDKLECFVSVVLLPLLFAVVGLRTDVFAIQKMKNLWIVQLIICIAFIGKIIGALLPLLFCRMPFRDALSLGLIMNCKGTVELALLIDLRLRNVLNDELFAIMILTLVLVTGIVSPVVKALYDPSRRFLAYKRRTILHHQSNEELRILACIHKQDNVLAIFNLLSASNPTEKNRIDLVVLQLVKLVGRASSVLVAHIPREKPSDKIFNAFSKFEDAYRGKVSLHCYKGISPYATMHNDVCYLALEKRITFIIIPFHKQWIIGGMAESSFAFKQLNKNVLEKAPCSVGVLIDRGNQKKFWCGYMNESTYLVAVFFFGGADDREVLAYAKRMLDQPNVNITLFQFTSSKDIVGGTERSKKLDTQILSEFRLSAFRNDRVSYKEEVVMNGRDVLSVIEEMESFYDLVMVGRRHEDSQLMAELTKWKHGELGSVGEILASLNIGDKTSILVVQQQTRFWGSRDPEESTHLRRVNI 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g00896 797 Pfam Sodium/hydrogen exchanger family 61 444 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Trre5g00896 797 Gene3D - 52 454 IPR038770 -
Trre5g00896 797 PANTHER CATION/H + ANTIPORTER 27 779 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g00896 Trre-Chr5 6103993 6107719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g00896 14 797 Antiporter Super Family AT2G13620 38.509 0.0 542
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g00896 K26731 - gmx:102665255 1178.31