Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g00883 ATGGGAGTGTCACATGCACTTTGTGATGGATTTGGTATATCACAATTTTTCAAAGCAATTGTTGAACTTGCAAATGGAAAAAGTGAGCCATCAGTGAAACCTGTGTGGGAAAGAGAGAGACTAATTGGATCAATAACTAAACAACCATTTCAACTATGCCCTATGGACAAAGAATCTGCTGCATTCACACCTTTCTTGAATCAAATCAATAGCACAGATATTAAGCAATATTGTTTTAATGTGGAGGGTGAAATGATAGCAAGGCTTAAGTTAAGTTTAATGAAGGAAAGTGAAAATATAAAGTTCACAACTTTTGAATCACTTGCAAGTTATGTGTGGAGGTCAAGAGAAAGAGCCTTAAAACTTAGTAACAATGGGAAAACAATGTTGAATATGTTAGTTGGTATTAGGCGCAACATGAAGGGTTATGATCCTTTGCCTGAAGGGTATTATGGGAATTCTATTGTGGATGGAAAACTTGTGTTAGAAGTTAGTGAGCTCAATGAAAGGCCACTCTTTGAAATTGTTAAGTTGATTAAAGAGACTATAAATGTTGCTTCCACCACTGATTATGTCACGAATTCGATCAAAACTTGGGAGAGGATATCAGCATGGAATTGGAAGCTAGTGGTGCAGTGA 639 0.3646 MGVSHALCDGFGISQFFKAIVELANGKSEPSVKPVWERERLIGSITKQPFQLCPMDKESAAFTPFLNQINSTDIKQYCFNVEGEMIARLKLSLMKESENIKFTTFESLASYVWRSRERALKLSNNGKTMLNMLVGIRRNMKGYDPLPEGYYGNSIVDGKLVLEVSELNERPLFEIVKLIKETINVASTTDYVTNSIKTWERISAWNWKLVVQ 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g00883 212 Pfam Transferase family 2 201 - -
Trre5g00883 212 Gene3D - 66 210 IPR023213 -
Trre5g00883 212 Gene3D - 1 54 IPR023213 -
Trre5g00883 212 PANTHER ACYL TRANSFERASE 4 2 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g00883 Trre-Chr5 6015891 6016529 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g00883 1 171 Monolignol Biosynthesis Gene Families AT5G48930 23.429 3.11e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g00883 K20240 - gmx:100801843 218.394