Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g00882 ATGGCTTATCAAAAAGCCCTCTTAAAACTTGAAATGAAAGATGTTGTGCTTGTAAAACCATCAAAATCCACTCCTTCTTGTATACTTTCTCTCTCAACAATTGACAATAAAGCCTATAATGATGAAATATGCCAAACCATTCATGTTTACCGATCATCAACTCATAATTCTCCTGGCAAAAGTTTCAACCCTTGTCTTTTGATAAAACAAGCACTCGCAAAGTCTTTGTTTTATTATTATCCTCTTGCAGGTAGAGTGGTGAAACATGCTCATGATGGAAAACTTAGAGTCATGTGCAATCCTAATGAAGAAAATTCCGGTGTTCCATTCTTGGAAGCAAATGCTAAATGCACCCTCTCTTCTCTTCATTACTTGGACAATACCGACACTGATATTACGAAACACTTGATGCTTGATCTTCCTTCTCCGCGCGATAAAACTTACCCTTTGGTTTTCATGGTGACAAAATTTCTTTGTGGAGGTTTCACAATTGGAATGGGAGTGTCACATGCACTTTGTGATGGATTTGGTGGATCTCAATTCTTCAAAGCAATTGTTGAACTTGCAAGTGGAAGAATTGAGCCATCGGTGAAACCTGTGTGGGAAAGAGAGAGACTAGTTGGTTCAATAACTAAACAACCATTTCAATCCCTCATCGATAAAGATTCAGCTGCATTTTCGCCTTTTCTTCAACCGAAAACAGTTATTAAACAATATTGTTTTAAGATTGAAAGTGATGTGATAAAAAGACTCAAGATGAGTTTGATGAAAGAAAGTGAAAGTCATTCTAATATCACAACTTTTGAATCACTTGCTGCTTATGTGTGGAGATCAAAAGCAAGAGCATTAAAACTTAGTTCCAATGGAAAAACAGTGTTGATTATGGAAGTTGGTATGAGAGGAAAAAACTTAAAGGATTATGAATATACTCTTCCTGAAGGGTATTATGGGAATGCTATTGTGGATGCAGATCTTGTGTTAAAAGTTAATGAGCTTAATGAAAAACCACTCTCTGAGATTGTTAAGCTTATAAAAGAGACTAAAAATGTTGCTTCCACTATCGATTATGTGAGAAAATCGATCGATACTTTGGAGACAATAAAACAAGAGGAAGAGGACGAGGACGAAGATATGAACATTGATGATGCAATAATGTATGTGACAGATTGGAAGAATTTAGGTTTCATGGAAAGTGTAGATTTTGAAGGGTATGAATTAGTGAATTTAGTGCCAGCACCATGCAACTTGTTTAAGTGTCTTGATACATGCATTTTCATGTCTCAGAATAAAATTGACGATCCATTAGAAGGAGTTAGGATTTTTATATCACTTCCTGTTGCTGCCATGCCTAAGTTTAGGGAAGAAATTGATGCTCTCAGATTTCTTTGA 1389 0.3585 MAYQKALLKLEMKDVVLVKPSKSTPSCILSLSTIDNKAYNDEICQTIHVYRSSTHNSPGKSFNPCLLIKQALAKSLFYYYPLAGRVVKHAHDGKLRVMCNPNEENSGVPFLEANAKCTLSSLHYLDNTDTDITKHLMLDLPSPRDKTYPLVFMVTKFLCGGFTIGMGVSHALCDGFGGSQFFKAIVELASGRIEPSVKPVWERERLVGSITKQPFQSLIDKDSAAFSPFLQPKTVIKQYCFKIESDVIKRLKMSLMKESESHSNITTFESLAAYVWRSKARALKLSSNGKTVLIMEVGMRGKNLKDYEYTLPEGYYGNAIVDADLVLKVNELNEKPLSEIVKLIKETKNVASTIDYVRKSIDTLETIKQEEEDEDEDMNIDDAIMYVTDWKNLGFMESVDFEGYELVNLVPAPCNLFKCLDTCIFMSQNKIDDPLEGVRIFISLPVAAMPKFREEIDALRFL 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g00882 462 PANTHER ACYL TRANSFERASE 4 9 457 - -
Trre5g00882 462 Gene3D - 230 456 IPR023213 -
Trre5g00882 462 Pfam Transferase family 9 457 - -
Trre5g00882 462 Gene3D - 6 217 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g00882 Trre-Chr5 6006849 6008350 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g00882 8 415 Monolignol Biosynthesis Gene Families AT5G48930 26.328 3.31e-27 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g00882 K20240 - gmx:100783730 449.899