Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g00879 ATGGTTTCCAAAGTTCACAAGAGAACAGCCTTGTACAGGAGGAAACTACAACTACTACGTTCAATCACTTACCCTTCGCACAATAAAGCCTCAGTGATATTGGATTCAACAGAGTATATACAAGGATTAAAGCAAAAACTTGAAGAAATGAAACAGTTACCTGTTCCAACAACACATTCGATTATTGATTATAATCCAATGCCTAAGCTTAAAGTTGAGACACAAGAAGAGGGCTTTGTGATCAAGGTTGTGAGTGAAAGGAGTTGCCAAGGATTGCTAGTGTTCATCTTGGAAGCTTTTGAAGAACTTGGTCTTGAAGTACTCCATGCTAGGGTTTCTTGTGTTGATGACTTCTGTTTAGAAGCTGTTGGGAACAAAGAGAACAATGAGGATACTAGTCCTTTGAGTGTACAAGTAGTTGAAGAAGTAGTGTCTCAAGCTATTCAAAACTGGAGGGAAGTTACACAACATTAA 474 0.384 MVSKVHKRTALYRRKLQLLRSITYPSHNKASVILDSTEYIQGLKQKLEEMKQLPVPTTHSIIDYNPMPKLKVETQEEGFVIKVVSERSCQGLLVFILEAFEELGLEVLHARVSCVDDFCLEAVGNKENNEDTSPLSVQVVEEVVSQAIQNWREVTQH 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g00879 157 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 12 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g00879 Trre-Chr5 5967372 5968912 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g00879 - - gmx:100305696 206.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g00879 5 5967372 5968912 Trre5g00879 5 5967372 5968912 ECH
Trre5g00879 5 5967372 5968912 Trre9g04439 9 52020422 52024243 ECH
Trre5g00879 5 5967372 5968912 Trre13g01792 13 15053587 15057106 ECH
Trre13g01792 13 15053587 15057106 Trre5g00879 5 5967372 5968912 ECH