Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g00855 ATGGCGAGTATCCTTACTGATTTGGTGAAGCCATATGTGGAGAAATTGATAAATGGGGCAATCACAGAATCAAGTTATATATGTTGTTTCACGTGCATTGCTAAAGATTTTGAAGATGAGAAAGCTAAGTTGGAAGTAGAAAGGACAACTTTCAACCAACAAGTTGATATAGCAACTAGAGGAGGGGAAGATGTTCAAGCGAATGCTCTTTTTTGGGAAGAACAAGCTGTAGATCTCATTCAAGAAGACACCAAAACAAAACAAAAATGTTTTTTTGGGTTTTGTTGTAATTGCATATGGCGATATAGAAGGGGAAAGGAACTGGCAAATAAGAAGGAGCAAATCAAAAAATTGATTGAAACTAGAAAGGAACTTACAATTGGACTCCCTGCTCATCTTCCAGATGTTGAACGTTATTCATCCCAACACTATATTCCTTTTAAAAGTAGGGAATCCAAATGCAAAGAGCTTTTGGATGCACTGAATGATGACAACAATTATATAGTCGGGTTGCATGGGATGGGGGGCACAGGAAAAACTACACTGGCAAAGGAAGTGGGTAAGAAACTTAAGCAGTCTAAACAATTTACTCAAGTCGTCGATACGACAGTGTCATTTTCTCCTGATATTAAAAAGATTCAAGATGATATTGCTGGACCCTTGGGAATATCGAAATTTGATAAATGTAATGAATCAGACCGACCCAAAAAATTATGGAGCCGATTAACCAATGGTGAGAAGATTCTTTTAATATTGGATGATGTGTGGGGAGATATCAATTTTAATGAAATAGGGATTCCATACAGTGACAATCGCAAAGGCTGCAGTGTTTTAGTTACCACTCGCAATTTGTCAGTGTGTAACAGAATAGGATGCAGTAGCACAATCCAACTGGATCTCTTATCTGAAGATGATGCATGGATCATGTTCCAAAGGCATGCTGGTCTAAGTGAAGCTTCGATAAAGGATTTGCTCGACAAGGGCCGTAAAATTGCTAATGAATGCAAAAGGCTACCAATTGCAATTGCTGCTATCGGTAGTAGTTTAAAGGGAAAAAAATACCGGGAAGAGTGGGATGTGGCCTTAAATTCCTTGCAGAAACATATGCCCGTGGATGGTGTTGATAATGATTTAGCTGACATTTATAAATGTTTAAAGTTTAGCTATGATCATCTCAAGAACAAAAATGCCGAGGAATTGTTCCTCTTAAGTTCTGTATTCCAAGAAGATGAAGAAATCTCTTCTGAAATTCTGACTAGGCTTGGCATAGGAGCTGGCCTCTTTGGGGAACGTAATGACAAATACAACAATACTCGAAATCTAGTAGTTGTAGCAAAAAATAAACTCCTTGATTCATGTTTACTGTTGAAGACAAATAAAGGAGATGTAAAAATGCATGACTTGATTCGTGAAGTAGCACAATGGATAGCGAACAAAGATCAAACTCAAGTGGTAAATTTTTCTAACAAAAATCAAAAGTCATTAGTTGGAAGGGATAATAATATCAAATATTTGTTATTTGATGGAAATCCAAAGGATTTGTTTTCCTTTAGGTTTGATGGTTCTAAACTTATGATTCTGATTTTCAACATGGGGAGAGGTTGCTTTGAGGACGTTCCAGTTTCATTCTTTGAAAATATTGCAGGGCTTAGAGTTTTGAATTTAATAGCAAAATGCCAAACTATATCATTACCACCATCAATTCGGTCATTGAGGAATATTCTTTCTCTATTAGTTGAAAGGGCTAAATTGGGTGACATCTCTGTTTTGGAAAGCCTGCAAAGTCTTGAGACACTTGATTTGAAACATTGTAATATGGACAAACTTCCTGAAGAAATTGCACAATTAAGGGAACTTAGATTGTTGAACTTGGAAGACTGTACAATTGAAAGTAATAATCCATTTGAAGTTATCCAGAGATGCCAGTCCCTTGAAGAATTGTACTTCTGTCGTAGTTTCAATGATTTTTGTCAGGAAATAACCTTACCTACATTGGAAAGGTATCATCTAACTGATAGTTATCATATGATTTATGATTCTTCACTATCAAAATGCATGTGTCTTGAAAATGATTATTTGTCAAAAGCAACATTTAAGCATGTGATGCAAACATCGGAGCATGTTAGCTTGGAAAGAATCAAGAAAGAGTGGAAAAATCTCATGCCTGAAATTGTTCCTATAGATCAAGGTATGAATGATCTAATTGAGCTTCATTTGAATGATGTTTCACAACTACAGTGCCTCGTAGACACCGAACATATTAGTTCTCAAGTACCAAATGTGTTTTCCAAGTTGGTTGTACTAGAGCTCAACCAAATGAATAATTTGGAAGAATTTTGCAATGGTCCCATCTCGCTTGACTCTATGGACAGCTTAGAAGAACTAACTATCATGTATTGTGGAAATTTGAGAAGCTTGTTTAAAGGCAATGTAAATCTCTGCAATCTAAAGACTGTGAAAATAGAAAGATGCTCCAAATTAGTTTCTGTTTTGTCACCTTCTGGAAGCCTGCCGCTGTTGGAAGAATTAAATATAAGCAATTGTGATCATTTGGAAACCATATTTTCATATGAAAGGAGAGTGGATGACGCGATTGAAGAAATATTAATTCCAAAGCTCAAAGTTATCAAAATAGAAAGTTGTCATAAGTTGACTTACATATTTGATCAAGAAGTCAAACTGGCTTCACTATTAGAATTGGAGCTATTTGATGTGCCAAATTTCATTGACATATTTCTACAACCATTATCCATTAAAGGGTCTTCTAATTCCATTTCCAAGCCTATCAAATCCAATACATTCTTTTGTTGTTATAGATCCAAAAGTACTAAAGTCCCATCTGTGGTTTCTAAGGATCAGCCGCAACCCTGCTCAATCTGCACGGAAACTAGTTCATATTGTCTTAACATATGGGAACGTGCTCAATGTCTTTCGAGACTATCACATATCTTGTGCAATATTAAAGAAATAAAACTGTGGAATCTTTCAAAGATAAAATCAGTGTTTATGTTGTCTATTGCACCAAAAATGTCATTGGAGAGCTTGACTATTGAAGAATGTGATGAATTGGAGCACGTAGTAGTAGACATTGGATATGGCAGTGGTGGAAATGAATTGGGCAATGTCTTCCCAAAATTAAAAGAGCTCAATGTTGAAGATTGTGAGAAATTGCAATACATATTTGGACACATTAATGCTAGTGATGATCATGATCAAGACAACATTGAGATTCAACTTCATATTCCAGCATTGAAAAGTCTCATGTTTGTAAAACTCCAAAGTTTAATCAGCATGTGTCCCAAACAATATCAGACAACATTTCCAGCTTTGGAAAAAATTGAGCTCAATGAATGCTCTCAGGTTGATGTTAAATCTATTGGTGATTTTACCTTCCTTACTTCAATTTCAAGATATCTGGGCAGTACAACCATCAAGCAATTCAGTGGGAACATAGAACATTTTCTAGCTCTGGAAAGGCTCGAGGTATCTAAATCCAATGTAGAAAGTATATTATGTCTCAATGAAGAAAGTGAGCGGCAGATAAACTTGGGGTTGCAAAACATGATATTGAGAAAACTACCTATGATGATATATCTTTTTGTGGGTCCTAAAAATGCATTTACCCTCAAAAATCTTAAGAGTATAGTCATCTTTGGATGTAAAAAATTGGAAATAGTTTTCTCCACCTCTGTTTTAAGATCCCTATCACAGTTGTCTATTCTAAGAATAGAAGAATGCAATGAGTTGAAGCATATCATTGAAGATGACGACGATGATATTGAAAATCAAAGAATGTCAAATGTAATGAGCTCAAAAACATGCTTCCCAGTGCTAAAAGCCCTTGCAGTAGTAAAGTGCAACAAGTTGAAAAGTGTCTTTCCGATCACCATGAGCAAAGAGCTTCCGAAGCTGGAGGCTATGATAATAAGTGAAGCAGATGAGCTGGAAGAAATATTCAAAAGTGTAGGTGATGATCAGAAAGTTAAGATTCCAAACCTGAAATTTGTAGGATTTGACAACCTACCAAGCCTCTTCCATGTCCATGGAATTTTTCAGACCGTAGAAAATCGTTTCGTACAGAATTGTAAAAAACTCTCTCTGACTTCCTTAAGATCTAGCAGAGATATTTGGAAGGATTTGCAGCATCTAAGGGATGGCATAGATGATGATACGTATTCTGATCTGCGGCGTCTATGTCAAAAATTACAAGAAATGCCCAAAGGCTCAGACTTTGAAGAGTTATGTAATGAAATTCCACAGGGTATTCAGGTAAGCGTTGAAGAAGGAACTGCGTCAACTAGTTATGCCAACACAATAACATCATCAACTCATTTAGAATCAGAATATGGTAATGGCCAAATAGACAAAACTTTTCCCGTTTCAGCCACGGAGTGTCTTAACATCGAAGATGTTAATCTTGGAGGCTCACACGAAACAACTCAAACTAACAATCAAGTTTCTCTAAATGATGAAGCTTTGATGCAAGTAAGCTCAACCATTGAACAACAGTTTCTTAAGGATGATGAAATAATAGTTTCTGGTTTAGGGATGCCTTCAGCAATAAATTCTCCACCAAATTCACATAAGTTGATGAATGAACAATCAATGCATCAACAACGTTTGAAGAACCAAGAAAGTCCACTTGGAGAAATAGATGCTACCATAAAACCTTCTCAAGGTATCAAGATAAGTGTGGAAGATGGAACTACATCAGCTAATGCCAACACAATAACATCAACTCATTTAGAATTAGTAAGTTCATCTCATGAACAAGATGTTGATGTCAGAGACTCTCAGAAAACTACTAAGACCAATATTGATCAAGTTTCTCTAAATGACGGTGCTTTCATGAAAGTAAGCTCAATTATTGAACAACAATTTCCGAAGGATGATCCCTCTCCAAGCAATAACCTTTCTTTTCCTTTTTCATTTCAAACTCATTCAATGCCTTTTCATGGGAACCCTTCTCAAAAAGTGGAAGACTCGAGTTCTCCTTCTCTTATCACATGCGAGCTTGAGCAGCTGGTCTCTAAGAAGATTTTGGCTATTGAGAACTTGTCTCTATTGACTGATTTTCTTGTTAAGCATCCTTCGGTTCTTTTAAGGGACACATCGCTTAGTAACAGATACAAGGGTTATGCGTATAACTGTCTTTCTGAACTGTTGAAATTCCTCCAAACGCATAGTGTGCTGGATGTGTTAGGTTCAAGCCACTCTGAATTTGTCGAGTTATTAAAAGATGCACGCAGATTTCCTTTCGATAAGGATTGGTTAGACAGTGTTGAAAAGTGCTCTATGTTTCCCGGTTTACAAGTCTCTCAAGCTGCACTGCAAAAACTGTTGGACTCAAAACACATCTTGACTCAACATGTGAAGGATCTTAAGCATCAATTGGCTTCCTCCGAAGCCGTTTTGGAGAGTATCATTCAACAGGAGGCACAAATTTTAGAAACACTTGCTGCTCTAAGTGATCCGATTGGCTATTAG 5487 0.3654 MASILTDLVKPYVEKLINGAITESSYICCFTCIAKDFEDEKAKLEVERTTFNQQVDIATRGGEDVQANALFWEEQAVDLIQEDTKTKQKCFFGFCCNCIWRYRRGKELANKKEQIKKLIETRKELTIGLPAHLPDVERYSSQHYIPFKSRESKCKELLDALNDDNNYIVGLHGMGGTGKTTLAKEVGKKLKQSKQFTQVVDTTVSFSPDIKKIQDDIAGPLGISKFDKCNESDRPKKLWSRLTNGEKILLILDDVWGDINFNEIGIPYSDNRKGCSVLVTTRNLSVCNRIGCSSTIQLDLLSEDDAWIMFQRHAGLSEASIKDLLDKGRKIANECKRLPIAIAAIGSSLKGKKYREEWDVALNSLQKHMPVDGVDNDLADIYKCLKFSYDHLKNKNAEELFLLSSVFQEDEEISSEILTRLGIGAGLFGERNDKYNNTRNLVVVAKNKLLDSCLLLKTNKGDVKMHDLIREVAQWIANKDQTQVVNFSNKNQKSLVGRDNNIKYLLFDGNPKDLFSFRFDGSKLMILIFNMGRGCFEDVPVSFFENIAGLRVLNLIAKCQTISLPPSIRSLRNILSLLVERAKLGDISVLESLQSLETLDLKHCNMDKLPEEIAQLRELRLLNLEDCTIESNNPFEVIQRCQSLEELYFCRSFNDFCQEITLPTLERYHLTDSYHMIYDSSLSKCMCLENDYLSKATFKHVMQTSEHVSLERIKKEWKNLMPEIVPIDQGMNDLIELHLNDVSQLQCLVDTEHISSQVPNVFSKLVVLELNQMNNLEEFCNGPISLDSMDSLEELTIMYCGNLRSLFKGNVNLCNLKTVKIERCSKLVSVLSPSGSLPLLEELNISNCDHLETIFSYERRVDDAIEEILIPKLKVIKIESCHKLTYIFDQEVKLASLLELELFDVPNFIDIFLQPLSIKGSSNSISKPIKSNTFFCCYRSKSTKVPSVVSKDQPQPCSICTETSSYCLNIWERAQCLSRLSHILCNIKEIKLWNLSKIKSVFMLSIAPKMSLESLTIEECDELEHVVVDIGYGSGGNELGNVFPKLKELNVEDCEKLQYIFGHINASDDHDQDNIEIQLHIPALKSLMFVKLQSLISMCPKQYQTTFPALEKIELNECSQVDVKSIGDFTFLTSISRYLGSTTIKQFSGNIEHFLALERLEVSKSNVESILCLNEESERQINLGLQNMILRKLPMMIYLFVGPKNAFTLKNLKSIVIFGCKKLEIVFSTSVLRSLSQLSILRIEECNELKHIIEDDDDDIENQRMSNVMSSKTCFPVLKALAVVKCNKLKSVFPITMSKELPKLEAMIISEADELEEIFKSVGDDQKVKIPNLKFVGFDNLPSLFHVHGIFQTVENRFVQNCKKLSLTSLRSSRDIWKDLQHLRDGIDDDTYSDLRRLCQKLQEMPKGSDFEELCNEIPQGIQVSVEEGTASTSYANTITSSTHLESEYGNGQIDKTFPVSATECLNIEDVNLGGSHETTQTNNQVSLNDEALMQVSSTIEQQFLKDDEIIVSGLGMPSAINSPPNSHKLMNEQSMHQQRLKNQESPLGEIDATIKPSQGIKISVEDGTTSANANTITSTHLELVSSSHEQDVDVRDSQKTTKTNIDQVSLNDGAFMKVSSIIEQQFPKDDPSPSNNLSFPFSFQTHSMPFHGNPSQKVEDSSSPSLITCELEQLVSKKILAIENLSLLTDFLVKHPSVLLRDTSLSNRYKGYAYNCLSELLKFLQTHSVLDVLGSSHSEFVELLKDARRFPFDKDWLDSVEKCSMFPGLQVSQAALQKLLDSKHILTQHVKDLKHQLASSEAVLESIIQQEAQILETLAALSDPIGY 1828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g00855 1828 Gene3D Ribonuclease Inhibitor 1063 1334 IPR032675 -
Trre5g00855 1828 SUPERFAMILY RNI-like 1123 1344 - -
Trre5g00855 1828 Pfam NB-ARC domain 154 390 IPR002182 GO:0043531
Trre5g00855 1828 Coils Coil 108 128 - -
Trre5g00855 1828 Coils Coil 1791 1811 - -
Trre5g00855 1828 PRINTS Disease resistance protein signature 168 183 - -
Trre5g00855 1828 PRINTS Disease resistance protein signature 335 349 - -
Trre5g00855 1828 PRINTS Disease resistance protein signature 242 256 - -
Trre5g00855 1828 PRINTS Disease resistance protein signature 591 607 - -
Trre5g00855 1828 Gene3D - 132 297 IPR027417 -
Trre5g00855 1828 SUPERFAMILY L domain-like 464 916 - -
Trre5g00855 1828 Gene3D - 300 393 IPR042197 -
Trre5g00855 1828 Gene3D Ribonuclease Inhibitor 707 931 IPR032675 -
Trre5g00855 1828 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 394 IPR027417 -
Trre5g00855 1828 SUPERFAMILY RNI-like 870 1123 - -
Trre5g00855 1828 FunFam Probable disease resistance protein At1g61300 132 295 - -
Trre5g00855 1828 Coils Coil 34 54 - -
Trre5g00855 1828 Gene3D Ribonuclease Inhibitor 473 676 IPR032675 -
Trre5g00855 1828 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 868 1120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g00855 Trre-Chr5 5834719 5841873 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g00855 169 628 WRKY Transcription Factor Family AT5G45050 23.077 1.37e-13 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g00855 - - tpra:123913720 1989.54