Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g00851 ATGACGAGTTTCCTTACTGATTTGGTGAAGCCATATGTGGAGAAATTGATAAATGGAGCAATCACAGAATCAAGTTATATATGTTGCTTCACGTGCATTGCAAAGGATTTTGAAGCTGAAAAAGCTAAGTTGGAAGTAGAAAGGACAACTTTCAACCAACTAGTTGATGTAGCAACTAGAGGAGGGGAAGATGTTCAAGCAAGTGCTCTTTTTTGGGAAGAACAAGCTGTAGATCTCATTCAAGAAGACACCAAAACAAAACAAAAATGTTTTTTTGGATTTTGTTGTAATTGCATATGGCGATATAGAAGGGGAAAGGAACTGGCAAATAAGAAGGAGCAAATCAAAAAATTGATTGAAACTAGAAAGGAACTTGCAATTGGACTACCTGCTCATCTTCCAGATGTTGAACGTTATTCATCCCAATACTATATTCCTTTTAAAAGTAGGGAGTCCAAATGCGAAGAGCTTTTAGATGCACTGAAAGATGACAACAATTATATAGTCGGGTTGCAAGGGATGGGGGGCACAGGAAAAACTACACTGGCAATGGAAGTGGGTAAGAAACTTAAGCAGTCCAAACAATTTACTCAAGTCATTGATACAACAGTGTCATTTTCTCCTGATATTAAAAAGATTCAAGATGATATTGCTGGACCCTTGGGAATATTGAAATTTGATGAATGTAATGAATCAGACCGACCCAAAAAACTATGGAGCAGATTAACCAATGGTGAGAAGATTCTTCTAATATTGGATGATGTGTGGGGAGATATCAATTTTAATGAAATAGGGATTCCATACAGTGACAATCGCAAAGGCTGCAGTGTTTTAGTTACCACTCGCAATCAGTTGGTGTGTAACAGACTAGGATGCAGTAGCATAATCCAACTGGATCTTTTATCTGAAGATGATGCATGGATCATGTTCCAAAGGCATGCTGGTCTAAGCGAAGTTTCAACAAAAGATTTGCTCAAGAAGGGCCGTAAAATTGCTACTGAATGCAAAAGGTTACCAATTGCAATTGCTGCTATCGCTAGTAGTTTAAAGGGCAAAAAACACCGGGAAGACTGGGATGTGGCCTTAAATTCCTTGCAGAAACATATGTCTATCGATGGTGTTGATAATTATTCGGCTGACATTTATAAATGTTTAATGTTTAGCTATGATTATCTCAAGAACAACAATGCTGAGGAATTGTTCCTCTTAAGTTCTGTATTCCAAGAAGATGAAGAAATCTCTACTGAAGTTCTGACTAGGCTTGGCATAGGAGTTGGCCTCTTTGGGGAACACTATGACAAATACAACAATGCTCGAAATCTAGTAGCTGTAGCAAAAAATAAACTACTTGATTCATGTTTACTGTTGAAGATAAATGAAGGAAAGGTAAAAATGCATGACTTGGTTCGTGAAGTAGCCCAATGGATAGCGAACAAAGATACGATTCAAGTAGTAAATTTTTCTTACAAAAATCAAAAGTCATTAGTTGGAAGGGATAATAATATCAAATATTTGTTATTTGATGGATATCCAATGGATTTGTGTTCCTTTAGGTTTGATGGTTCCAAACTTATGATTCTGATTTTCAACATGGGGGGAGGTTGCTTTGAGGACATTCCAGTTTCATTCTTTGAAAATATTGCAGGGCTTCAAGTTTTGAATTTAATAGCAAAATGGCAAACTATATCATTACCACAATCAATTCGGTCATTGACGAATATTCGTTCTCTAATAATTGAAGATGCCGATTTGGGTGACATCTCTGTTTTGGGAAGTCTGCAAAGTCTTGAGACACTTGATTTGAAATATTGTGAGATTGAAAAACTTGCTGAAGAAATTGCAAAATTGAAGGAACTTAGATTGTTGAACTTGGTACGCTGTAAAATTAAAAGTAATAATCCATTTGAAGTTATCCAGAGATGCCCATCCCTTGAAGAATTGTACTTCTATTGGAGTTTCAATGATTTTTGTCAGGAAATAACCTTACCTGCTGCATTGGAAAGGTATCATATCTGTGATTATTTTGGTGGAATGAACGATTCACTGTCAAAATGTGTGACTCTTGGAAATGATTATTTGTCAGAAGCAACACTTAAGCATGTGATGCAAACAGCAGAGCATCTTAAGTTGGTAAGAATTAGGAAGGGATGGACGAATATTATGCCTGAAATAGTTCCTATAGATGAAGGTATGAATGATCTAATTGAGCTTCATTTGAATGATGATTCACAACTACAGTGCCTCATAGACACCCAACATATTGGTTCTCAATTACCAAATGTATTTTCCAAGTTGGTTGTACTAGAGCTCGATGGAATGAGTAATTTGAAAGAATTATGCAATGGTCCTATCTCCACTGACTCTGAACAATTTAGAGAATTTTCTGTTTTTCATCTGTCAACTTCTGGAAGCCTGCCGTTATTGGAAGAATTGGATATAAGTGACTGTGACCAATTGGAAAACATATTTACATGTGAAAGGAGGAGAGTGGATGACGCGATTGAAGAAATATTACTTCCAAAGCTCAAACTTGTCACAATACGGGGATGTGATAAGTTGACTTACATATTTGACCAAGAAGTCAAACTGGATTCACTAATAAAACTGGAGCTAAGTTGCTTGTCAAATTTCAAAGACATATTTCCAAAATTTGATAATTCCATTGAAGGGTCATCTAATTCCATTTCCAAGCCACAAACACAATTGCAATTGCAGGTGGAGGAGGCAATTAAACCCAATATATTCTCTTGGACTCCTATTTGTTGTTTTAGATCCACAAGTACTAAAGTCCCATCGGTAACAAGTTCATATTGTTTTAGCATATGGGAACATATCAGGACAATACAACCATCAAGCAATTCAGTGGGAACATAG 2874 0.364 MTSFLTDLVKPYVEKLINGAITESSYICCFTCIAKDFEAEKAKLEVERTTFNQLVDVATRGGEDVQASALFWEEQAVDLIQEDTKTKQKCFFGFCCNCIWRYRRGKELANKKEQIKKLIETRKELAIGLPAHLPDVERYSSQYYIPFKSRESKCEELLDALKDDNNYIVGLQGMGGTGKTTLAMEVGKKLKQSKQFTQVIDTTVSFSPDIKKIQDDIAGPLGILKFDECNESDRPKKLWSRLTNGEKILLILDDVWGDINFNEIGIPYSDNRKGCSVLVTTRNQLVCNRLGCSSIIQLDLLSEDDAWIMFQRHAGLSEVSTKDLLKKGRKIATECKRLPIAIAAIASSLKGKKHREDWDVALNSLQKHMSIDGVDNYSADIYKCLMFSYDYLKNNNAEELFLLSSVFQEDEEISTEVLTRLGIGVGLFGEHYDKYNNARNLVAVAKNKLLDSCLLLKINEGKVKMHDLVREVAQWIANKDTIQVVNFSYKNQKSLVGRDNNIKYLLFDGYPMDLCSFRFDGSKLMILIFNMGGGCFEDIPVSFFENIAGLQVLNLIAKWQTISLPQSIRSLTNIRSLIIEDADLGDISVLGSLQSLETLDLKYCEIEKLAEEIAKLKELRLLNLVRCKIKSNNPFEVIQRCPSLEELYFYWSFNDFCQEITLPAALERYHICDYFGGMNDSLSKCVTLGNDYLSEATLKHVMQTAEHLKLVRIRKGWTNIMPEIVPIDEGMNDLIELHLNDDSQLQCLIDTQHIGSQLPNVFSKLVVLELDGMSNLKELCNGPISTDSEQFREFSVFHLSTSGSLPLLEELDISDCDQLENIFTCERRRVDDAIEEILLPKLKLVTIRGCDKLTYIFDQEVKLDSLIKLELSCLSNFKDIFPKFDNSIEGSSNSISKPQTQLQLQVEEAIKPNIFSWTPICCFRSTSTKVPSVTSSYCFSIWEHIRTIQPSSNSVGT 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g00851 957 Gene3D Ribonuclease Inhibitor 488 909 IPR032675 -
Trre5g00851 957 SUPERFAMILY L domain-like 464 886 - -
Trre5g00851 957 PRINTS Disease resistance protein signature 168 183 - -
Trre5g00851 957 PRINTS Disease resistance protein signature 242 256 - -
Trre5g00851 957 PRINTS Disease resistance protein signature 335 349 - -
Trre5g00851 957 PRINTS Disease resistance protein signature 803 819 - -
Trre5g00851 957 Pfam NB-ARC domain 151 390 IPR002182 GO:0043531
Trre5g00851 957 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 142 395 IPR027417 -
Trre5g00851 957 Gene3D - 389 475 IPR036388 -
Trre5g00851 957 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 35 895 - -
Trre5g00851 957 Gene3D - 132 296 IPR027417 -
Trre5g00851 957 FunFam Probable disease resistance protein At1g61300 135 294 - -
Trre5g00851 957 Coils Coil 599 619 - -
Trre5g00851 957 Gene3D - 300 388 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g00851 Trre-Chr5 5804292 5810066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g00851 169 508 WRKY Transcription Factor Family AT5G45050 23.055 1.41e-10 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g00851 - - tpra:123913720 1324.69