Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g00835 ATGCAGGAATTGATGATGGCAATGATAGACAATCCATCAAATGTGGGTGAGTGGACATTGGCAGAAATGTTAAATCAACCTGAATTATTTCAAAAAGCCGTACAAGAATTAGATAATATAGTTGGAAAAGATAGATTAGTTCAAGAATCAGATATTCCTAAACTCAACTTCTTGAAGGCTTGTGCAAGGGAAGCTTTTCTCCTTCATCCTATAACAGCTTTCCATGTTCCCCATGTTGCTATGAATGATACAATAGTTGGAAATTACTTTATACCAAAGGGTAGCCATATATTGCTTGGAAGAAGTGGTCTTGGGAAAAACCCAAAAGTATGGAGTGAACCTTACAAATTCAAACCAGAACGTCATCTCAAGAGAGATGGATCTAATATAAATTTGACAGAGCCAAATTTAAAGTTCTTATCTTTCAGTACAGGAAGGCGTGGTTGTCCGGGTGTCACGCTTGGGACAACAATCACTATATTGCTATTAGCTAGGTTGCTTCATGGCTTCACTTGGAGTGCACCTTCTGATATATCAACAATTAATTGTGCAGAATCCAATGGTCTTATGTTTCTAGATGAGCCATTGCAGGTTGTAGCAAAACCACGATTAGCAACAAAATTGTATAACTTTGGTCACTAG 642 0.3754 MQELMMAMIDNPSNVGEWTLAEMLNQPELFQKAVQELDNIVGKDRLVQESDIPKLNFLKACAREAFLLHPITAFHVPHVAMNDTIVGNYFIPKGSHILLGRSGLGKNPKVWSEPYKFKPERHLKRDGSNINLTEPNLKFLSFSTGRRGCPGVTLGTTITILLLARLLHGFTWSAPSDISTINCAESNGLMFLDEPLQVVAKPRLATKLYNFGH 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g00835 213 Gene3D Cytochrome P450 1 209 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00835 213 Pfam Cytochrome P450 3 198 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00835 213 SUPERFAMILY Cytochrome P450 3 203 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00835 213 PANTHER CYTOCHROME P450 98A9 3 210 - -
Trre5g00835 213 PRINTS E-class P450 group I signature 149 172 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00835 213 PRINTS E-class P450 group I signature 16 42 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00835 213 PRINTS E-class P450 group I signature 139 149 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00835 213 PRINTS E-class P450 group I signature 59 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00835 213 PRINTS E-class P450 group I signature 100 124 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00835 213 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 142 151 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g00835 Trre-Chr5 5718437 5719078 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g00835 1 209 Cytochrome P450 AT4G39950 56.938 6.87e-83 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g00835 - - gmx:100809902 308.916