Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g00834 ATGAAAGATGGAGGGCCTGGTGTTGAGGAAGTTGAACATGTTGATGCTGTTTTCATATTGCTTAACTATGTTTTTGCTTTCTCTACATCTAATTATATACCATGGTTGAGGTTACTTGACTTAGATGGCCATAAGGGGGAGATAAAAAATGCAATAAGGATAATGAACAAGTATCATGATTCTATCATTGATGAGAGAATCAAACAGTGGAACAATGGATCAAAGAATGTTGAAGAAGACATGCTAGATGTCTTGATTTCCCAGAAAGATGTCAATAATAATCCATTATTGACAACGAAGGAAATCAAGGCACAAGCTATTGAATTGATGATGGCAATGGTAGACAGTCCATCAAATGTGGTTGAGTGGATATTGGTAGAAATGTTAAATCAACCTGAATTATTTCAAAAAGCCACAGAAGAATTGGATAATATAGTTGGAAAAGATAGAATAGTTCAAGAATCAGATATTCCTATTAAAATTTTAAGAATCAGATAG 498 0.3353 MKDGGPGVEEVEHVDAVFILLNYVFAFSTSNYIPWLRLLDLDGHKGEIKNAIRIMNKYHDSIIDERIKQWNNGSKNVEEDMLDVLISQKDVNNNPLLTTKEIKAQAIELMMAMVDSPSNVVEWILVEMLNQPELFQKATEELDNIVGKDRIVQESDIPIKILRIR 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g00834 165 PRINTS E-class P450 group I signature 121 147 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00834 165 PRINTS E-class P450 group I signature 101 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00834 165 SUPERFAMILY Cytochrome P450 11 157 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00834 165 Pfam Cytochrome P450 27 157 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00834 165 Gene3D Cytochrome P450 4 159 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre5g00834 165 PANTHER CYTOCHROME P450 98A9 20 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g00834 Trre-Chr5 5705301 5706336 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g00834 2 158 Cytochrome P450 AT5G05260 51.899 7.93e-58 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g00834 - K12153 ag:AAT11920 232.646